Pseudoduganella umbonata: FCL38_18940
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Entry
FCL38_18940 CDS
T06138
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
mum
Pseudoduganella umbonata
Pathway
mum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCL38_18940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mum02000
]
FCL38_18940
Transporters [BR:
mum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FCL38_18940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_16
AAA_22
nSTAND3
NACHT
TsaE
AAA
AAA_18
AAA_5
AAA_33
MobB
RsgA_GTPase
AAA_29
nSTAND1
NB-ARC
PRK
AAA_25
NPHP3_N
AAA_24
Mg_chelatase
ATP-synt_ab
DUF5906
DEAD
AAA_23
AAA_30
AAA_28
DO-GTPase2
AAA_19
cobW
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QCP12262
LinkDB
All DBs
Position
4547755..4549584
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AA seq
609 aa
AA seq
DB search
MNAPARLATLASAAPATVSPATAALRVASLRVALDGGTPIVADIAFDLAPGQVLGLVGES
GSGKTTLATALLGHVRKGARIVSGTVTVNGHDILGADERTLRRLRGKLLAHVAQDPATAL
NPLHRLGRALDEVLALHEAGLDAQARRARIGETLHDVGLPDDDAFLRRFPHQLSGGQQQR
VLLALAFLPRPALIVLDEPTTALDVTTQARILDTIRQLCTSYGTAAIYVSHDLAVVSQLA
DRVLVLYAGRIVESAPAAGLFGRPAHPYTKGLLAAIPDIRKASSPRPIPGQAPTPGQHGG
GCAFAPRCAWRGAGCDSVPALASVGPGHAAACARPEALAAVAPIRFVDLPPPAPATAPLL
DVRHARAWYGARQVLFDAALAVAPGECVALVGESGSGKTTLARLLAGLGEHAEADVRYGD
ALLAMTVENRSMAQRRDIQYVFQNPYRALNPRQSVGTILRHVVRHLYPGESKPDARIEEV
LRQVALPPRVLHSYPSALSGGERQRVAIARALLCKPKLLICDEITSALDVSVQAAIIELL
QQLQAGGLAILFVTHNLGVVRSLADRIVVLRHGRVVEAGDTGQVLEQPRHEYTRTLVGDS
PSIHAFPSP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccggcacgccttgccacactggcatcggccgctccggccaccgtatcgcct
gccaccgctgcgctccgcgtggccagcctgcgcgtcgcgctcgacggcggaactcccatc
gtggcggacattgccttcgacctggcgccgggccaggtgctgggcctggtcggcgaatcg
ggctccggcaagaccacgctggccaccgcattgctgggacacgtgcgcaagggtgcgcgc
atcgtttcgggaaccgtgaccgtaaatggccacgacatcctgggtgcggacgagcgcacg
ctgcgccgcctgcgcggcaagctgctggcccacgtggcgcaggatccggcgacggcgctc
aacccgctgcaccggctgggccgcgcgctggatgaagtgctggcgctgcacgaagcgggg
ctcgacgcacaggcgcggcgcgcacgcatcggcgaaaccctgcacgacgtgggcctgccg
gacgacgacgcgttcctgcgccgcttcccgcaccagctctccggcggccagcagcagcgc
gtgctgctggcgctggcgttcctgccccgccccgcgctgatcgttctggacgaaccgacc
accgcgctcgacgtgaccacccaggcacgcattctcgacacgatccgccagctgtgcacc
agctacggcacggcggcgatctacgtgtcgcacgacctggccgtggtcagccagctggcc
gaccgggtgctggtgctgtatgcgggccgcatcgtcgaaagcgcgccggccgccgggctg
ttcggccgtccagcgcatccctacacaaaaggcctgctggcggcgattcccgacatccgc
aaggccagctcgccacggccgattcccggccaggcaccaacgcccggccagcacggcggc
ggctgcgccttcgcgccccgttgcgcctggcgcggcgccgggtgcgacagcgtgccggca
ctggccagcgtaggcccggggcacgccgcggcatgcgcgcggcccgaggcactggccgcc
gtggcgccgatccgcttcgtcgacctgccgcctccggcgcccgcgacggcgccgctgctg
gacgtacgccatgcgcgcgcctggtacggcgcgcggcaggtgctgttcgacgccgcgctg
gccgtggcgccgggcgaatgcgtggcactggtgggcgaatccgggtccggcaagaccaca
ttggcacggctgctggccggccttggcgagcatgccgaggcggacgtgcgctacggcgac
gcgctgctggcgatgacggtcgaaaaccgcagcatggcgcagcggcgcgacatccagtac
gttttccagaacccctaccgggcgctgaacccgcgccaaagcgtgggcacgatactgcgc
cacgtcgtgcgccacctttatcccggcgagagcaagccggacgcgcgcatcgaggaagta
ttgcggcaggtcgcactgccgccgcgggtgctgcacagctatccgtccgccctgtccggc
ggcgagcggcagcgcgtggcgatcgcacgcgcgctgctgtgcaagccgaaactgctgatc
tgcgacgagatcacctccgcgctggacgtttccgtgcaggccgcgatcatcgagctgctg
cagcagttgcaggccggcggcctggcgatcctgttcgtcacccacaacctgggcgtagtg
cgctcgctggcggaccgcatcgtcgtgctgcgccatggccgcgtggtcgaagcgggcgac
accggccaggtgctggaacagccgcgccacgaatacacccgcacgctggtgggcgactcg
cccagcatccatgcattcccttccccctga
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