Pseudoduganella umbonata: FCL38_20290
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Entry
FCL38_20290 CDS
T06138
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCL38_20290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mum03400
]
FCL38_20290
Enzymes [BR:
mum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FCL38_20290
DNA repair and recombination proteins [BR:
mum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FCL38_20290
Prokaryotic type
FCL38_20290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCP12506
LinkDB
All DBs
Position
complement(4864366..4865028)
Genome browser
AA seq
220 aa
AA seq
DB search
MTVRIEPSWKQHLHAEFDKPYWTELTGFVRAEYQAGHCCPPGKDIFRAFDLTPFDKVKVV
ILGQDPYHTPGAAMGFCFSVPDGNRPQPSLQNIFQELESDLGVRRTRTDLSDWAEQGVFL
LNAVLTVRARAAGSHAGKGWETFTDTAIRMLSEEREQLVFILWGSYAIAKKALIDTKKHL
VITSPHPSPFSAHKGFFGSRPFSKANEYLRAAGKEPIAWG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacgcatcgaaccctcctggaagcagcacctgcacgccgagttcgacaaacct
tactggaccgagctcacgggtttcgtgcgcgccgaataccaagccggccactgctgcccg
ccgggcaaggatatcttccgggccttcgacctgacgccgttcgacaaggtcaaggtcgtg
atcctcgggcaggatccataccacacgcccggcgccgcgatgggcttctgtttttccgtc
cccgatggcaaccgcccgcaacccagcctgcagaacattttccaggagctggaaagcgac
ctgggtgtgcggcgtacccgcaccgacctgtccgactgggcggagcagggcgtgttcctg
ctgaacgccgtgctgaccgtgcgcgcccgcgccgccggttcgcatgccggcaagggctgg
gagacgttcacggacacggcgatccgcatgctgtccgaggaacgcgaacagctggtgttc
atcctgtggggcagttacgcgatcgccaagaaggcgctgatcgacacgaagaagcacctc
gtcatcacgtcgccgcacccttcgccgttctcggcgcacaaagggttcttcggcagcagg
ccgttttcaaaggcgaacgagtacctgagggcggcggggaaggaaccgattgcctggggg
tga
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