Pseudoduganella umbonata: FCL38_22015
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Entry
FCL38_22015 CDS
T06138
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mum03000
]
FCL38_22015
Transcription factors [BR:
mum03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FCL38_22015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_23
HTH_IclR
HTH_31
MarR_2
HTH_Crp_2
HTH_10
Sigma54_DBD
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QCP12816
LinkDB
All DBs
Position
complement(5260276..5261286)
Genome browser
AA seq
336 aa
AA seq
DB search
MNLKALADTLGMSKTTVSRALNGYPEVSAATRERVLAAAAASGYRANPVARHLAVGRSNV
LGILYPLLPADLGDPMFLDVVGGISAALEAAGMNFIIAPVSPSNELPSYQQMVLGRRVDG
LIVSRTLVDDPRIAFLSEAGFPFVAHGRTNASEHHAWFDYDNAAGIRLALDALLAHGHRR
IALLGSPQTLNFARQRRDSFIDHLASAGLAVDPRYLIESAIDRRSGYQAMQQLLACGERP
TAVIVDSHLSGVGAVRALLDAGIDIGHDMSLVVWGRMADALAGLDVATIDQPDPRAAGAK
MGAMLLALLEGVPAASLQVLWQPVLVPGATIGQNRG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaagccctggccgacacgctcggcatgtcgaagaccaccgtcagccgcgcg
ctgaacggctacccggaagtttccgcggccacgcgcgagcgcgtgctggccgcggcggcc
gccagcggctaccgggccaatcccgtggcgcgccacctcgccgtcggccgcagcaatgtg
ctgggcatcctgtatccactgctgccggccgacctgggcgatccgatgttcctcgacgtg
gtcggcggcatttccgccgcgctggaagcggccggcatgaacttcatcattgcgccggtg
tcaccgtcgaacgaactgccgtcctaccagcagatggtgctgggccggcgcgtggacggc
ctcatcgtcagccgcacgctggtggacgacccgcgcatcgcgttcctgtcggaagcgggg
tttccgttcgtcgcgcatggccgcaccaatgccagcgaacaccacgcctggttcgattac
gacaacgccgccggcatccgtttggcgctcgacgccttgctggcgcacgggcatcggcgc
atcgccctgctcggttccccgcagaccctgaactttgcgcggcagcggcgcgacagtttc
atcgatcacctggccagcgccggactcgccgtcgatccccgttacctgatcgagtcggcg
attgaccggcgcagcggctaccaggcgatgcagcagttgctggcctgcggcgagcggccg
acggcggtgatcgtcgacagccacctgtccggcgtgggcgccgtgcgggcgctgctcgat
gcgggaatcgatatcgggcacgacatgtcgctggtggtgtgggggcgtatggccgatgca
ctggccgggctggacgtggcgaccatcgatcaacccgatccgcgggcggctggagcgaag
atgggggcgatgctgctggcgctgctggaaggggtgccggcggcgtcgctgcaggtgttg
tggcagccggtgctggtgccgggggcgacgatcggacagaatcggggctga
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