Pseudoduganella umbonata: FCL38_22850
Help
Entry
FCL38_22850 CDS
T06138
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00300
Lysine biosynthesis
mum00470
D-Amino acid metabolism
mum01100
Metabolic pathways
mum01110
Biosynthesis of secondary metabolites
mum01120
Microbial metabolism in diverse environments
mum01230
Biosynthesis of amino acids
Module
mum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FCL38_22850 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FCL38_22850 (lysA)
Enzymes [BR:
mum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FCL38_22850 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QCP12967
LinkDB
All DBs
Position
complement(5448221..5449498)
Genome browser
AA seq
425 aa
AA seq
DB search
MPHFDYQNGVLHAEGVSLPAIAEQFGTPTYVYSKAQLLDNFDAYANACAGRDALVCYAMK
ANSNLAILDLLARRGAGFDIVSGGELLRVIAAGGDPKKVIFSGVGKSEAEMRLALEHDIL
CFNVESIPELHRLNDVAGALGKKARVSLRVNPNVDPKTHPYIATGLKASKFGVAFDDALA
TYRTAAQLPNLEPVGIDCHIGSQLLDDTPLLEALDRLIELIDTLAAEGIHLHHLDIGGGL
GIDYGVAGEDQPAPAGDYVSRVFQRVEAWRADKHAGRGIKVIFEPGRSIVGNTGVLLTKV
EFIKHGEEKNFCIVDAAMNDMARPALYQAWMDMQPVVKREAAGAMFDVVGPICESGDWLA
RDRELPVEAGDLLVMKTAGAYGMTMASNYNTRGRAAEVIVDGGQVHLVRRRETPEELFAL
ESVIK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgccccacttcgattatcagaacggcgtgctgcacgccgaaggcgtttctttgcccgcc
attgcagagcaattcggtacgccgacctatgtgtactccaaggcccagctgctggacaat
ttcgatgcctacgcgaacgcctgcgccggccgcgatgcgctcgtatgctatgcgatgaag
gccaattcgaacctggcgatcctcgacctgctggcccgccgcggtgccggtttcgacatc
gtgtcgggcggcgagctgctgcgcgtgatcgccgccggcggcgatccgaaaaaagtgatc
ttctcgggcgtgggcaagagcgaggcggagatgcgcctggcgctcgagcatgacatcctg
tgcttcaatgtcgaatcgatccccgaactgcaccgcctgaacgacgtggccggcgcactg
ggcaagaaggcgcgcgtgtcgctgcgcgtgaacccgaacgtggatccgaagacgcacccg
tacatcgccaccggcctgaaggccagcaagttcggcgtggcgttcgacgacgcgctggcc
acctaccgcaccgcggcgcagctgccgaacctggagccggtgggcatcgactgccacatc
ggctcgcagctgctggacgacacgccgctgctggaagcgctggaccgcctgatcgaactg
atcgacacgctggcggccgaaggcatccacctgcaccacctggacatcggcggcggcctg
ggcatcgactacggcgtggccggcgaagaccagcccgcgccggccggcgattacgtgagc
cgcgtgttccagcgtgtcgaagcatggcgcgccgacaagcacgccggccgcggcatcaag
gtgatcttcgagccgggccgttcgatcgtcggcaacaccggcgtgctgctgacgaaggtg
gagttcatcaagcacggcgaggaaaagaacttctgcatcgtcgacgcggcgatgaacgac
atggcccgccccgccctgtaccaggcgtggatggacatgcagccggtggtgaaacgtgaa
gccgcgggcgccatgttcgacgtggtcggcccgatctgcgaatccggcgactggctggcg
cgcgaccgcgaactgcccgtcgaagcgggcgacctgctggtgatgaagaccgccggcgcg
tatggcatgacgatggcctcgaactacaacacccgcggccgcgccgccgaggtgatcgtc
gacggcggccaggtgcacctggtgcgccggcgcgagacgccggaagagctgttcgcgctg
gagtcggtgatcaagtaa
DBGET
integrated database retrieval system