Pseudoduganella umbonata: FCL38_23330
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Entry
FCL38_23330 CDS
T06138
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mum03000
]
FCL38_23330
Transcription factors [BR:
mum03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FCL38_23330
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
QCP13048
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Position
complement(5559302..5560231)
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AA seq
309 aa
AA seq
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MRNATLRQLKTFEAVARHLSFSRAAEELHLTQPAVSTQIRTLEGHVGATLFEQLGKKTFL
TQAGAELLPFSRAIILQFEEAEAAMAQHRGISGGRLDVAVISAGDYFFPQLMVAFARRHP
GVQLNLTVHNREELLGQLAANRTDLAVMVRPPSQDTQNDAFAPHPYVIVAAPQHALAAAG
REPIALRELMRHPFVVRERGSDTWHSMEDAFGPRLAELQVAMEIKSTETIKQAVIAGIGL
GFLSAHTIGREVASGSLVVLPVERFPLMLNWYVVHRREKRLPPVASAFRQFLLDDGAEWI
GRLIPTAGG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcggaatgcgacactgcgccagctgaagacgttcgaggcggtggcgcgccacctgagt
ttttcccgcgccgccgaggagctgcacctgacgcagcccgccgtatcgacacagatccgc
acgctggagggccacgtgggcgccacgctgttcgagcagctgggcaagaagaccttcctg
acccaggcgggcgccgagctgctgccgttcagccgcgcgatcatcctgcagttcgaggaa
gccgaggcggcgatggcccagcaccgcggcatctccggcggccgcctggacgtggccgtg
atcagcgccggcgactactttttcccgcagctgatggtggcgttcgcgcggcgccaccct
ggcgtgcagctgaacctcaccgtgcacaaccgcgaagagctgctcggccagctggccgcc
aaccgcaccgatctcgccgtgatggtgcgtccgccgtcgcaggacacgcagaacgatgca
ttcgcgccacacccgtatgtgatcgtcgccgcgccgcagcatgcgctggcggcggccggc
cgcgaaccgatcgccttgcgcgaactgatgcggcacccgttcgtggtgcgcgagcggggt
tccgatacgtggcattcgatggaggatgcattcgggccgcgtctggccgagctgcaggtg
gcgatggagatcaagagcaccgagacgatcaagcaggccgtcatcgccggcatcgggctg
ggcttcctgtcggcgcacacgatcgggcgcgaagtggcgtcgggcagcctggtggtgctg
ccggtcgagcgcttcccgctgatgctgaactggtacgtggtgcaccgccgcgagaaaagg
ctgccgccggtcgccagcgccttccggcaattcctgctcgacgatggcgcggagtggatc
ggccggctgataccgacggcgggcggctga
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