Pseudoduganella umbonata: FCL38_24760
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Entry
FCL38_24760 CDS
T06138
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00550
Peptidoglycan biosynthesis
mum01100
Metabolic pathways
mum01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FCL38_24760 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FCL38_24760 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mum01011
]
FCL38_24760 (mrdA)
Enzymes [BR:
mum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FCL38_24760 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
mum01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FCL38_24760 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QCP13282
LinkDB
All DBs
Position
5894061..5896304
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AA seq
747 aa
AA seq
DB search
MTELKNNERELHLFRVRLTLLGTLVFICFALLLARLVWLQVIRHSDYMAQAEDNRIAVVP
IQPNRGLILDRNGVILARNYSAYTLEITPSKLRIPLEEMIDSLAAIVEVTPKDRRRFKKL
MDESKNFASIPLRTRLSDEEVARFTANRFRYPGVEVQARLFRNYPLGETASHVIGYIGRI
NQKEAKALEEREDAANYNGTDYIGKEGLEKSYEKQLHGITGYEEVEVSAGGRAIRTLSRT
PPTSGSNLILSIDIELQKVAEEAFGEWRGALVAIEPSTGDVLAYVSRPGYDPNLFVDGID
TQSWNELNTSLDRPMVNRPLSGTYAPGSTFKPFMALAALETGKRTPSQAIFDPGYMYLGT
HKFRDDVVHGHGTVDLRKSIVVSCNTYYYHLGRDMGIDMIHDFMKPFGFGQKTGIDLDNE
KTGVLPSREWKQSRYKKNPRAGKWVGGDTISVSNGSGYNSYTPLQIAHAVANLANNGIVM
KPHLVKIIEDGGTRARTLTVPKESYRIPLKQQNIDLIKDAMVGVVSEQGGTATRAFAGVQ
YTVGGKTGTAQVVGIRKNEKYNANTLAERLRDNALFTAFAPADKPRIVIAMVVENAGFGG
AVAAPIARKVLDYYLLGKRPTEKNTDKVPKEDAEVFEPIEGPLAEEEAALAREQLAAQQG
QGAQPIPGQAPQAPAAAQPNTTPSATPGATPNVAGKPAAVPPGPGLMPVRPATTAPPAAT
PRPATQAPAPAPTRPQQPAAIPPGNRN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagctgaagaacaacgagcgcgaactgcacctgttccgggtgcggctgacgctg
ctcggcaccctcgtcttcatctgcttcgcgctgctgctggcgcgcctggtctggctgcag
gtgatccggcacagcgactacatggcgcaggccgaggacaaccgcatcgccgtggtgccg
atccagccgaaccgcggcctgatcctggaccgcaacggcgttatcctggcgcgcaactat
tcggcctatacgctcgagatcacgccatccaagctgcgtatcccgctcgaggagatgatc
gattcgctggccgccatcgtggaggtgacgccgaaggaccggcgccgcttcaagaagctg
atggacgagtcgaagaacttcgccagcattccgctgcgcacccggctgtccgacgaggaa
gtggcgcgcttcaccgcgaaccgtttccgctaccccggcgtggaggtgcaggcacgcctg
ttccgcaactacccgctgggcgagacggcttcgcacgtgatcggctacatcggccgcatc
aaccagaaggaagccaaggcgctcgaggagcgcgaggacgcggcgaactacaacggcacc
gactacatcggcaaggaaggcctggaaaaaagctatgagaagcaattgcatggcattacc
ggctacgaggaagtggaagtctcggccggcggccgcgcgatccgcacgctgtcgcgcacc
ccgcccacgtccggcagtaacctgatcctgtcgatcgacatcgaactgcagaaggtcgcc
gaggaagcgttcggcgaatggcgcggcgcgctggtggcgatcgaaccgtccaccggcgac
gtgctggcctacgtgtcgcggccgggctatgacccgaacctgttcgtcgacggtatcgac
acgcagagctggaacgaactgaatacatcgctggaccggccgatggtgaaccggccgctg
tccggcacctacgcgcccggttccacgttcaagccgttcatggcgctggccgcgctggag
acgggcaagcgcacgccgtcgcaggcgatcttcgatccgggctacatgtaccttggcacc
cacaagttccgcgacgacgttgtgcacggccacggcaccgtggacctgcgcaagtcgatc
gtcgtgtcgtgcaacacgtattactaccacctgggccgcgacatggggatcgacatgatc
cacgacttcatgaagccgttcggcttcggccagaagaccggtatcgacctggataacgaa
aagaccggcgtgctgccgtcgcgcgaatggaagcagtcgcgctacaagaagaatccgcgg
gccggcaagtgggtcggcggcgacacgatttcggtgtcgaacggttccggctacaactcc
tatacgccgctgcagatcgcccacgcggtggcgaacctggccaacaacggcatcgtgatg
aagccgcacctggtcaagatcatcgaggatggcggcacacgcgcccgcacgctgaccgtg
ccgaaggaaagctaccgcattccgctgaagcagcagaacatcgacctgatcaaggatgcg
atggtcggcgtggtgagcgagcagggcggcaccgcgacccgggccttcgcgggggtgcag
tacacggtgggcggcaagaccggtaccgcgcaggtcgtcgggattcgcaagaacgagaag
tacaacgccaatacgctggccgagcgcctgcgcgacaatgcgctgttcaccgccttcgca
ccggccgacaagccgcgcatcgtgatcgcgatggtggtcgagaacgccggtttcggtggc
gccgtggccgcgccgatcgcgcgcaaggtgctcgactactacctgctcggcaagcggccg
accgaaaagaacaccgacaaggtgccgaaggaagatgccgaagtgttcgagcccatcgag
ggcccgctcgccgaggaagaggcggcactggcgcgcgaacagctggcggcgcagcaggga
cagggcgctcagccgattcccggacaggcaccgcaggcgcccgcggcggcgcaaccgaac
acgacaccgagcgcgacaccgggcgcgacaccgaacgtggccggcaagccggcggccgtg
ccgccggggccgggactgatgccggtgcggcccgcgacgaccgcgcctccggccgcgacg
ccgcgccctgcgacacaggcaccggctcccgcgccgacccggccgcagcaaccggcggcc
atcccgccgggtaacaggaattaa
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