Pseudoduganella umbonata: FCL38_24770
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Entry
FCL38_24770 CDS
T06138
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mum01011
]
FCL38_24770
Enzymes [BR:
mum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FCL38_24770
Peptidoglycan biosynthesis and degradation proteins [BR:
mum01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FCL38_24770
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QCP14897
UniProt:
A0ABX5UXA7
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All DBs
Position
5897481..5898467
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AA seq
328 aa
AA seq
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MLALAGCGGPEVVGKLPGAPKVKPKHREPGVPDLPPAGSGRGGYYKDDGPGDDPPPNLLQ
TPDAEVRNDPLLPRANRPYTVFGTTYEPIPNDKPYTARGLGTWYGKKFHGQRTSSGELYD
MYKMSAAHPTLPIPSYARVTNLTNGKSVVVRINDRGPFKSSRVIDVSYTAALKLGLLLNG
SSELEVTRLMPDEIDKMVAARKAGVVIAAVEGVPVSALQPGAPLLASAGPDELEDFILSR
GTAPDTAAPSSNGYYLQLGAYAKEASAAMMRERVAGATRGSDFSVVQVGPLYRLYGGPFV
SREEAAAAAARLPTGLRLKPLIVQREIN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgctggccggctgcggcggcccggaagtcgtcggcaagctgccgggggcgccg
aaggtcaagccgaaacaccgcgaaccgggcgtgcccgacctgccgccggccggctcgggc
cgcggcggctactacaaggacgacggccccggcgacgacccgccgccgaacctgctgcaa
acgcccgatgcggaggtgcgcaacgatccgctgctgccgcgcgccaatcgtccctacacg
gtgttcggcaccacgtacgagccgatcccgaacgacaagccctataccgcgcgcgggctc
ggcacctggtacggcaagaagttccacgggcagcgtacgtcgtccggcgagctgtatgac
atgtacaagatgtcggcggcgcatccgaccctgccgattccttcgtatgcgcgggtgacc
aacctgacgaacggcaagtccgtcgtcgtgcgcatcaatgaccgcggcccgttcaagtcg
tcgcgcgtgatcgatgtttcctataccgcggcactgaagctgggcctgctgctcaacggc
agcagcgagctcgaagtgacgcgcctgatgccggacgagatcgacaagatggtggcggca
cgcaaggccggcgtcgtcatcgccgcggtggaaggcgtgcccgtgagcgcgctgcagccc
ggcgcgcccctgctggcgagcgccggaccggacgagctggaagacttcatcctgtcgcgc
ggcacggcgccggataccgcggcgccatcgtcgaacggctattacctgcagctgggtgcc
tacgccaaggaagccagcgccgccatgatgcgcgaacgcgtcgccggcgccacgcgcggc
agcgacttttccgtcgtgcaggtcgggccgctgtaccggctgtacggcggcccgttcgtg
tcccgcgaagaagccgccgccgccgccgcccggctacccaccggcctgcggctgaaaccc
ctgatcgtgcagcgcgaaatcaattag
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