Pseudoduganella umbonata: FCL38_24995
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Entry
FCL38_24995 CDS
T06138
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCL38_24995
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mum01007
]
FCL38_24995
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mum03016
]
FCL38_24995
03029 Mitochondrial biogenesis [BR:
mum03029
]
FCL38_24995
Enzymes [BR:
mum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
FCL38_24995
Amino acid related enzymes [BR:
mum01007
]
Aminoacyl-tRNA synthetase
Class I (A)
FCL38_24995
Transfer RNA biogenesis [BR:
mum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FCL38_24995
Prokaryotic type
FCL38_24995
Mitochondrial biogenesis [BR:
mum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FCL38_24995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
S4_2
TyrRSs_C
Motif
Other DBs
NCBI-ProteinID:
QCP13325
LinkDB
All DBs
Position
5948009..5949337
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AA seq
442 aa
AA seq
DB search
MDTNSPAPGASASASGPASGPASVPVSTAASATSASNPPLPLSDTVLEALAIAKRGVDEL
LIESEFAQKLARSEASGVPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGD
FTSMIGDPSGRNATRPPLTREQIELNAQTYFKQASLVLDPAKTEIRYNSEWCDQLGARGM
IQLASRYTVARMMERDDFAKRFKNGTPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFN
LLVGRELQKDWGQEPQCILTMPLLEGLDGVDKMSKSKNNYIGITEPANTMFAKVMSISDT
MMWRYYELLSWRSLDDVAALKKAIEGGANPRDAKVAIAQEIVERFHSRQAAEDALADFVN
RSKGGIPDDIAEIAVGGAPLGVAQLLKQTGLCASTSEAMRMIDQGGVRIDGTVISDKALK
AEAGTFVLQVGKRKFARIVLSA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaattccccggcgccaggcgcttcagcttcagcatcaggaccagcttcagga
ccagcttcagttccagtttcgaccgcggcttccgctacttccgcttccaatccgccattg
cctcttagtgacaccgtactagaagcactcgccattgccaagaggggcgtggacgaattg
ctgatcgaaagcgagttcgctcagaaacttgcgcgttccgaagcgagcggcgtgccgctg
cgcatcaagctgggcctggacccgacggcacccgacctgcacctgggccacaccgtggtg
ctgaacaagatgcgccagctgcagaacctgggccaccaggtgatcttcctgatcggcgac
ttcacgtcgatgatcggcgacccttcgggccgcaatgccacgcgtccgccgctgacccgc
gagcagatcgaactgaacgcccagacctacttcaagcaggcttcgctggtgctcgatccc
gcgaagacggaaatccgctacaactccgaatggtgcgaccagctcggcgcgcgcggcatg
atccagctggcttcgcgctacacggtggcgcgcatgatggaacgcgacgatttcgccaag
cgcttcaagaatgggacaccgatctcggtccatgagttcctgtacccgctgatgcagggc
tacgattcggtggcgctgaagagcgacctggaactgggcggcaccgaccagaagttcaac
ctgttggtcggccgcgaactgcagaaggactggggccaggagccgcagtgcatcctgacg
atgccgctgctggaaggcctcgacggcgtcgacaagatgtcgaagtcgaaaaacaactac
atcggcatcaccgagccggccaatacgatgttcgccaaagtgatgagcatttcggacacg
atgatgtggcgctactacgagctgctgtcgtggcgctcgctcgacgacgtcgcggcgctg
aagaaagccatcgaaggcggcgccaacccgcgcgatgcgaaagtggcgatcgcccaggaa
atcgtcgagcgcttccactcgcgccaggcggccgaggatgcgctggccgacttcgtcaac
cgctcgaagggcggcattccggacgacatcgccgaaatcgccgtcggcggcgcgccgctg
ggcgtggcgcaactgctcaagcaaaccggactgtgtgcatcgacctccgaggcgatgcgc
atgatcgaccagggcggcgtgcgcatcgacggtaccgtcatcagcgacaaggcgctgaag
gccgaagccggcacgttcgtgctgcaggtcggcaagcgcaagttcgcccgcatcgtcctg
tcggcatga
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