Pseudoduganella umbonata: FCL38_25065
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Entry
FCL38_25065 CDS
T06138
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCL38_25065
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mum01007
]
FCL38_25065
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mum03016
]
FCL38_25065
Enzymes [BR:
mum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
FCL38_25065
Amino acid related enzymes [BR:
mum01007
]
Aminoacyl-tRNA synthetase
Class I (U)
FCL38_25065
Transfer RNA biogenesis [BR:
mum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FCL38_25065
Prokaryotic type
FCL38_25065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QCP13337
UniProt:
A0A4P8HTQ1
LinkDB
All DBs
Position
complement(5961553..5964366)
Genome browser
AA seq
937 aa
AA seq
DB search
MELAKSFEPADIEQFWRSEWEKRGYYAASMDLSQPSFSIQLPPPNVTGTLHMGHAFNQTI
MDGLTRYHRMLGHNTAWIPGTDHAGIATQIVVERQLDAQKISRHDLGREKFVEKVWEWKE
KSGSTITGQMRRLGTSPDWNREYFTMDEPRSKVVSEVFVRLFEQGLIYRGKRLVNWDPVL
GTAVSDLEVVSEEEDGSMWYIKYPLADGSGTLTVATTRPETMLGDVAVAVDPTDERYEAL
VGKLLKLPLTDREIPVIADSYVDKAFGTGCVKITPAHDFNDYAVGQRHNLDMPSILTLDA
KIADNAPEAYRGLDRFAARKQIVADLEALGLLEQVKPHKLMVPRGDRTGVVIEPMLTDQW
FVAMSKPAPEGTFNPGKSITDVALEKVASGEIKFVPENWTTTYNQWLNNIQDWCISRQLW
WGHQIPAWYDEAGNIFVARTEEEALAKQQAAGSTGALRRDSDVLDTWFSSALVPFSTLGW
PEETPDLKAFLPSSVLVTGFDIIFFWVARMVMMTAHFTGKVPFETVYVHGLVRDSQGQKM
SKSKGNTLDPIDLIDGIGIEELVAKRTTGLMNPKAAEKIAKATRKEFPEGIAAYGTDAVR
FTMASYASLGRNINFDLGRAEGYRNFCNKLWNATRFVLMNTEGKDCSASDADLSPADKWI
VSLLNRTEQEVAKGFADYRFDNIATAIYKFVWDEYCDWYLELAKVQVQQGTEGQQRATRN
TLLRVLEVVLRLAHPVIPFVTEQLWQTVAPLADNGKNEGDTEGKSIMVQPYPIANEAAID
TAAEAWIAELKGLTDATRNLRGEMKLSPSVRVPLIVEATAADKDKVAAFAPYIQMLGKLS
EVQIVDALPESPAAVSVVGTTKLMLKVEIDVKAERERLSKEIARLEGEVAKASGKLSSES
FVARAPAAVVAQEKERVATFSATLDKLREQFAKLPAE
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggaattagccaagtctttcgagcctgccgacattgaacagttctggcgcagcgaatgg
gagaagcgcggttactacgccgcttcgatggacctctcgcagccctccttcagcatccag
ctgccaccgccgaacgtgaccggcacgctgcacatgggccacgcgttcaaccagacgatc
atggatggcctgacccgctaccaccgcatgctgggccataacacggcatggattccggga
accgaccacgccggcatcgccacgcagatcgtcgtcgagcgccagctcgacgcgcagaag
atctcgcgccatgacctgggccgcgaaaagttcgttgaaaaggtctgggagtggaaggaa
aaatccggttcgacgatcaccggccagatgcgccgcctcggcacctcgccggactggaac
cgcgagtacttcacgatggacgagccgcgctcgaaggtcgtctcggaagtgttcgtgcgc
ctgttcgaacagggcctgatctaccgcggcaagcgcctggtgaactgggatccggtgctg
ggcaccgccgtttccgacctggaagtggtatcggaagaagaagacggctcgatgtggtac
atcaagtacccgctggccgacggcagcggcacgctgacggtggcgaccacccgcccggaa
acgatgctgggcgacgtggccgtggcagtcgacccgaccgacgagcgctatgaagcgctg
gtgggcaagctgctcaagctgccgctgaccgatcgcgaaatccccgtcatcgccgactcc
tatgtcgacaaggcgttcggcaccggctgcgtgaagatcacgccggcgcacgatttcaac
gactacgcggtgggccagcgccacaacctggacatgccgtcgatcctgacgctggatgcg
aagatcgccgacaacgcgccggaagcctaccgtggcctggaccgcttcgccgcgcgcaag
cagatcgtcgccgacctggaagcgctgggcctgctggaacaggtcaagccgcacaagctg
atggtgccgcgcggcgaccgtaccggcgtggtcatcgaaccgatgctgacggaccagtgg
ttcgtcgccatgagcaagccggcaccggaaggcacgttcaatccgggcaagtcgatcacc
gacgtggcattggaaaaagtcgcctcgggcgaaatcaaattcgtgccggaaaactggacc
acgacatacaaccagtggctgaacaacatccaggactggtgcatctcgcgccagctgtgg
tggggccaccagatcccggcgtggtacgacgaagccggcaatatcttcgtcgcacgcacc
gaggaagaggcactggccaagcagcaggcggccggcagcaccggcgcgctgcgccgcgac
agcgacgtgctggacacgtggttctcgtccgcgctggtgccgttctccacgctgggctgg
ccggaagagacccctgacctgaaggcgttcctgccctcctccgtgctggtgacgggcttc
gacatcatcttcttctgggtcgcccggatggtgatgatgaccgcccacttcaccggcaag
gtgccgttcgagaccgtgtacgtgcacggcctggtgcgcgactcgcagggccagaagatg
tcgaaatcgaagggcaacacgctcgacccgatcgacctgatcgacggcatcggcatcgag
gaactggtggccaagcgcaccacgggcctgatgaatccgaaggccgcggaaaagatcgcc
aaggccacgcgcaaggaattcccggaagggatcgcggcctacggtaccgacgcggtgcgc
ttcacgatggccagctatgcttcgctgggccgcaacatcaacttcgacctgggccgcgcc
gaaggctaccgcaatttctgcaacaagctgtggaacgccacccgcttcgtgctgatgaac
acggaaggcaaggattgcagcgccagcgatgcggacctgtcgccggccgacaaatggatc
gtctcgctgctcaatcgcaccgagcaggaagtggcgaagggctttgccgactaccgcttc
gacaatatcgccacggcgatctacaagttcgtgtgggacgagtactgcgactggtacctg
gaactggccaaggtgcaggtacagcagggcaccgagggccagcagcgcgccacccgcaac
acgctgctgcgcgtgctggaagtggtgctgcgcctggcgcacccggtgatcccgttcgtg
accgaacagctgtggcagacggttgcgcctctcgctgataatgggaaaaatgaaggcgac
accgaaggcaagtcgatcatggtgcagccgtacccgatcgccaacgaagccgccatcgat
acggccgccgaggcatggatcgccgagctgaagggcctgaccgatgcgacgcgcaacctg
cgcggcgaaatgaagctgtcgccgtcggtgcgcgtgccgctgatcgtcgaagccaccgct
gccgacaaggacaaggtcgccgccttcgcaccgtacatccagatgctgggcaagctgtcc
gaagtgcagatcgtcgatgcgctgccggagtcgccggccgccgtgtccgtggtcggcacc
accaagctgatgctgaaggtggagatcgacgtgaaggccgaacgcgagcgcctgtcgaag
gaaatcgcccgcctggaaggcgaagtggccaaggcttccggcaagctgtcctcggagagc
ttcgtggcgcgtgcccctgctgccgtggtggcgcaggagaaggaacgcgtcgccaccttc
tcggccacgctcgacaagctgcgcgagcaattcgccaaactgccggccgagtaa
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