KEGG   Pseudoduganella umbonata: FCL38_25125
Entry
FCL38_25125       CDS       T06138                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
mum  Pseudoduganella umbonata
Pathway
mum03420  Nucleotide excision repair
mum03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FCL38_25125
   03430 Mismatch repair
    FCL38_25125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mum03400]
    FCL38_25125
Enzymes [BR:mum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FCL38_25125
DNA repair and recombination proteins [BR:mum03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FCL38_25125
   MMR (mismatch excision repair)
    Other MMR factors
     FCL38_25125
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 Viral_helicase1 AAA_30
Other DBs
NCBI-ProteinID: QCP13349
UniProt: A0A4P8HTR5
LinkDB
Position
complement(5977279..5979585)
AA seq 768 aa
MQNLLHNLNPEQLAAVTLPPQNALILAGAGSGKTRVLTTRIAWLIQTGQVSPGGILAVTF
TNKAAKEMLARLSGMMPINTRGMWVGTFHGLCNRLLRTHYRDAALPQSFQILDTQDQLSM
IKRLLKANNVDDEKFPPKSVMYFINNNKDQGLRASQVEAYDANERKLVELYGLYDDQCQR
EGVVDFAELLLRTYELLSRNQPLREHYQQRFRHILVDEFQDTNNLQYAWLKLIAGHGTGH
GGALFAVGDDDQSIYAFRGANVGNMVAFESEFSVKNLIKLEQNYRSHGHILDAANVLIAN
NSRRLGKNLRTDAGHGEPVRVYEATSDLQEAQWLVDEAKNLIGEGTRRSEIAVLYRSNAQ
SRVIEHALFSAGIPYTVYGGLRYFQRAEVKHAIAYLQLMDNPHNDSAFLRVVNFPARGIG
ARTLEQLQNAAETYGISMYAAVPYMVGKAGASLGAFVKLIEGVRFETQQMALPELVRITL
ESSGLLQHYANEKEGADRVENLEQMVSAATQFVGEEGYGQGAPAHLGPPADAQAGAAIIN
ADGVEIMDADAPLATVMSPLSAFLAHASLEAGDNQAQAGQDAMQLMTVHSAKGLEFDNVF
ITGLEEGLFPHESSSKEEGGVEEERRLMYVAITRARKRLYMCFCQTRMLHGQTRYNMKSR
FFDELPEESLKWLSPRVQTHWFANKKAQWDDVQINGGSDNAIAQRIAQKSASGSAWRIGE
SVSHAKFGEGVIVNIEGSGANCRAQINFGSAGMKVLDLSVAKLERLGR
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgcagaatctcctccacaatctcaatcccgaacaactcgccgccgtcaccctgcccccg
caaaacgccctgatcctggcgggcgcgggctcgggcaagacgcgcgtgctgactacgcgc
atcgcctggctgatccagaccgggcaggtgtcgccgggcggcatcctggccgtcacgttc
accaacaaggcggccaaggaaatgctggcgcgcctgtcgggaatgatgccgattaataca
cgcggcatgtgggtcggtaccttccacggcctgtgcaaccggctgctgcgcacccactac
cgcgatgccgccctgccccagtcgttccagatcctcgacacgcaggaccagctgtcgatg
atcaagcgcctgctgaaggcgaacaacgtggacgatgaaaagttcccgccgaaatcggtg
atgtatttcatcaataacaacaaggaccagggcttgcgtgccagccaggtcgaggcctac
gacgccaacgagcgcaagctggtggagctgtacgggctgtacgacgaccagtgccagcgc
gaaggcgtggtcgatttcgccgaactgctgctgcgcacgtatgaactgttgtcgcgcaac
cagccgctgcgcgagcattaccagcagcgcttccgacacatcctcgtcgacgagttccag
gacaccaacaacctgcaatatgcgtggctgaagctgatcgccggccacggcaccgggcat
ggcggcgcactgttcgccgtcggcgacgacgaccagagcatttatgcgttccgcggcgcc
aacgtgggcaacatggtggcgttcgagtccgagttcagcgtgaagaacctgatcaagctg
gaacagaactaccgctcgcacggccacatcctcgatgcggccaacgtgctgatcgcgaac
aacagccgccgcctgggcaagaacctgcgcacggacgcgggccatggcgaaccggtgcgc
gtgtacgaggccacgtccgacctgcaggaagcgcaatggctggtcgacgaagcgaagaac
ctgatcggcgaaggcacgcggcgcagcgagatcgccgtgctgtaccgctcgaacgcgcaa
tcgcgggtgatcgagcatgcgctgttctcggccggcattccgtacaccgtgtacggcggc
ctgcgctacttccagcgcgccgaggtgaagcacgcgatcgcgtacctgcagctgatggac
aatccgcacaacgattcggctttcctgcgcgtggtgaatttcccggcgcgcggcatcggc
gcgcgcacgctggaacagttgcagaacgccgccgagacctatggcatctcgatgtatgcg
gcggtgccgtacatggtcggcaaggccggtgcgtcgcttggcgccttcgtcaagctgatc
gaaggcgtgcgcttcgaaacgcagcagatggcgctgccggaactggtgcgcatcacgctg
gaatcgtccggcctgctgcagcactacgccaacgagaaggaaggcgccgaccgggtggaa
aacctggaacagatggtcagcgcggccacccagttcgtcggcgaggaaggctacggccag
ggcgcgccggcgcacctcggcccgccggccgatgcgcaggcgggtgcggcgatcatcaat
gccgatggcgtggaaatcatggatgccgatgcgccgctggccaccgtgatgtcgccgctg
tcggccttcctcgcgcatgcgtcgctggaagcgggcgacaaccaggcgcaggccggccag
gatgcgatgcagctgatgacggtgcactcggccaagggcctggaattcgacaacgtgttc
atcaccgggctggaagaaggcctgttcccgcacgaaagcagctcgaaggaagaaggcggc
gtcgaggaagagcggcggctgatgtacgtggcgatcacgcgggccaggaagcgcctgtac
atgtgcttctgccagacccgcatgctgcacggccagacgcgctacaacatgaaatcgcgc
ttcttcgacgaactgccggaagaatcgctgaagtggctgtcgccgcgcgtgcagacgcac
tggttcgccaacaagaaggcccagtgggatgacgtacagatcaatgggggaagcgacaat
gcgatcgcccagcgcatcgcccagaagtcggcctccggctcggcctggcgcatcggcgaa
tcggtatcgcacgccaagttcggcgaaggcgtaatcgtcaacatcgaaggcagcggcgcc
aactgccgggcgcagatcaacttcggcagcgcgggcatgaaggtgctggacctgtcggtg
gcgaagctggagcggctgggcaggtaa

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