Pseudoduganella umbonata: FCL38_25145
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Entry
FCL38_25145 CDS
T06138
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum03030
DNA replication
mum03410
Base excision repair
mum03420
Nucleotide excision repair
mum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCL38_25145 (polA)
03410 Base excision repair
FCL38_25145 (polA)
03420 Nucleotide excision repair
FCL38_25145 (polA)
03440 Homologous recombination
FCL38_25145 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mum03032
]
FCL38_25145 (polA)
03400 DNA repair and recombination proteins [BR:
mum03400
]
FCL38_25145 (polA)
Enzymes [BR:
mum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FCL38_25145 (polA)
DNA replication proteins [BR:
mum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FCL38_25145 (polA)
DNA repair and recombination proteins [BR:
mum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FCL38_25145 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FCL38_25145 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QCP13352
LinkDB
All DBs
Position
5982061..5984811
Genome browser
AA seq
916 aa
AA seq
DB search
MQKTLLLVDGSSYLYRAFHALPDLRSPDGHPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDLYPEYKATRASMPSDLSLQIEPIHEAVKAMGWPILMVEGVEADDVIGTLAVT
AEKSGMDVIISTGDKDLAQLVTPHVTLINTMSNEKLDEAGVLAKFGVPPNRIIDYLTLIG
DTVDNVPGVAKCGPKTACKWLAQYDSLEGVIANADKIGGAVGANLKAALPWLPKGRELIT
VKTDCDLAQHMMSISETLVAREEDHESLLAFFNKYGFKTLLRELKALTPSAQVPGQTGPA
APEGPTGDMFAQPPANVRYDTVVTAAQLDEWIARIEGAELVALDTETTSLEPMNAQLVGI
SLATEPGLACYIPVAHRYAGVPEQLSRDEVLARLKPWLEDAAKPKLGQNLKYDAHIFANH
GVTLRGIVHDTLLQSYVFESHRTHDMDSLAMRHLNHKTIAYEEVCGKGASQICFDQVELQ
RATDYAAEDADITLRLHLAMHGHVTGDEGLTAVYSKIELPTAVVLQKIERNGVLIDAGLL
ATQSNELGARIVELEQKAYELAEGPFNLGSPKQIGEIFFNKLKLPVVKKTPSGAPSTDEE
VLQKLAEDYPLPKVLLEYRGMAKLKSTYTDKLPKMINPQTGRVHTNYAQAVAVTGRLASN
DPNLQNIPIRTAEGRRIREAFIAPEGSHLVSADYSQIELRIMAHISEDEAMLRAFAEGVD
IHRATAAEIFGVPPDEVNSEQRRYAKVINFGLIYGMSAFGLAANLGIDRTAAQNYIDRYF
QRFHGVKRYMDETRLEAKANGYVKTVFGRRLWLPEINSPNGPRRQAAERAAINAPMQGTA
ADLIKLAMIAVQDWIEKENLKSRMIMQVHDELVLEVPDDELALVRDTLPKLMAGVAELKV
PLVAEVGVGKNWEEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaccttgctgctggtcgacggttccagctatctctaccgtgccttccacgca
ttgcccgacctgcgcagcccggacggccacccgaccggcgccatgcacggcatggtcaat
atgctgcgccgcctgcgtgccgattacccggccgcctacatcgcctgcgtgttcgatgcc
aagggcaagaccttccgcgacgacctgtatccggaatacaaggcgacgcgcgcctcgatg
ccatccgacctgtcgctgcagatcgagccgatccatgaagcggtgaaggcgatgggctgg
ccgatcctgatggtcgaaggggtcgaggccgacgacgtgatcggcacgctggctgtcacg
gccgagaagagcggcatggacgtgatcatctccaccggcgacaaggatctggcgcagctg
gtcacgccgcacgtcacgctgatcaatacgatgagcaacgaaaagctcgatgaagcgggc
gtgctggcgaaattcggcgtgccgccgaaccgcatcatcgattacctgacgctgatcggc
gataccgtcgacaacgtgccgggcgtggccaaatgcgggccgaaaacggcctgcaagtgg
ctggcgcagtacgacagcctggaaggcgtgatcgccaatgccgacaagatcggcggcgcg
gtcggcgccaacctgaaggcggcgctgccgtggctgccgaaaggccgcgagctgatcacc
gtgaaaacggattgcgacctggcgcagcacatgatgtcgatctcggaaacgctggtggcg
cgcgaggaagaccatgaatcgctgctggcgttcttcaacaaatacggtttcaagacgctg
ctgcgcgagctgaaggcgctgacgccatcggcgcaggtgcccggccagaccggcccggcc
gcgccggaaggcccgaccggcgacatgttcgcccagccgcccgccaacgttcgctacgat
accgtggtgaccgcggcccagctcgacgaatggatcgcccgcatcgagggcgccgagctg
gtggcgctcgacacggaaaccacgtcgctcgaaccgatgaatgcgcagctggtcggcatc
tcgctggccaccgagccgggcctggcgtgctacatcccggtggcgcaccgctatgcgggc
gtgcccgagcagctgtcgcgcgacgaggtactggccaggctgaagccatggctggaagat
gccgcgaagccgaagctgggccagaacctgaagtacgacgcgcacatcttcgccaaccac
ggcgtgacgctgcgcggcatcgtgcacgacacgctgctgcagtcgtacgtgttcgaatcg
caccgcacgcacgacatggacagcctggcgatgcgccacctgaaccacaagaccatcgcc
tatgaagaggtgtgcggcaagggcgcaagccagatctgcttcgaccaggtggaactgcag
cgagccaccgactatgcggcggaagatgccgacatcacgctgcgcctgcacctggcgatg
cacggccacgtgacgggcgacgaaggcctgacggccgtgtacagcaagatcgagctgccg
accgccgtggtgctgcagaagatcgagcgcaacggcgtgctgatcgacgccggcctgctg
gccacgcagtcgaacgagctgggcgcgcgcatcgtcgaactggaacagaaggcgtatgaa
ctggccgaagggccgttcaacctgggttcgccaaagcagatcggcgagatcttcttcaac
aagctgaaactgccggtcgtcaagaagacgccgagcggcgcgccctccaccgacgaggaa
gtgctgcagaaactggccgaggattacccgctgccgaaagtgctgctggaataccgcggc
atggccaagctgaagtccacgtacaccgacaagctgccgaagatgatcaacccgcagacg
ggccgcgtgcacaccaactatgcgcaggccgtggcggtgacggggcgcctggcgtcgaac
gatccgaacctgcagaacatcccgatccgcacggccgaagggcgccgcatccgcgaagcg
ttcatcgcgccggaaggcagccatcttgtctcggccgactattcgcagatcgagctgcgc
atcatggcgcacatctccgaggacgaagccatgctgcgcgctttcgccgaaggggtcgac
atccaccgcgccaccgccgccgagatcttcggcgtgccgccggacgaagtgaacagcgag
cagcgccgctatgccaaggtgatcaacttcggcctgatctacggcatgagcgcgttcggc
ctggccgccaacctgggcatcgaccgcaccgccgcgcagaactacatcgaccgctacttc
cagcgcttccatggcgtgaagcgctacatggacgaaacgcgcctggaagccaaggcgaac
ggctatgtgaagacggtcttcggccgccggctgtggctacccgagatcaattccccgaac
ggcccgcgccggcaggccgccgaacgggccgcgatcaacgcgccgatgcagggcaccgcg
gccgacctgatcaagctggcgatgatcgccgtgcaggactggatcgagaaggaaaacctg
aagtcgcgcatgatcatgcaggtccacgacgaactggtgctggaggtgccggacgacgaa
ctggccctggtacgcgacacgctgccgaagctgatggccggcgtggccgagctgaaggtg
ccgctggttgccgaagtcggggtcgggaagaactgggaggaagctcactga
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