Pseudoduganella umbonata: FCL38_25180
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Entry
FCL38_25180 CDS
T06138
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FCL38_25180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mum03400
]
FCL38_25180
Enzymes [BR:
mum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FCL38_25180
DNA repair and recombination proteins [BR:
mum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FCL38_25180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
IFRD
Phage_coatGP8
Motif
Other DBs
NCBI-ProteinID:
QCP13359
LinkDB
All DBs
Position
5992448..5992714
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AA seq
88 aa
AA seq
DB search
MVNKTNSAENAAPASAPVSFEAAMAELAQLVTQMESGQLPLEASVAAYARGSELVKYCAT
QLDKVESQVKVLEGDMLKPFADGDEGAP
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggtcaataaaacaaacagcgctgaaaatgccgcgccagcttccgcgcccgtctccttt
gaagcggcgatggccgagctggcgcagctcgtcacgcagatggaatccgggcaactgccg
ctggaggcatccgtcgcggcctacgcgcgcggttcggaactggtgaaatactgcgccacc
cagctggacaaggtggaatcgcaggtcaaggtcctcgaaggcgacatgctcaagccgttc
gccgacggcgacgagggcgcgccatga
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