Pseudoduganella umbonata: FCL38_25495
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Entry
FCL38_25495 CDS
T06138
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mum03021
]
FCL38_25495 (rpoH)
Transcription machinery [BR:
mum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FCL38_25495 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QCP14909
LinkDB
All DBs
Position
complement(6052932..6053825)
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AA seq
297 aa
AA seq
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MMSAPSALVPAGSSALGLGFSGNLGNLDAYISAVNRLPMLTHEEEVSLGRRLKENNDLKA
AEKLVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQNVRLVSYAMHWI
KAEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKTGLDAMTPDQIDALAKTLDVKREEVI
EMETRLSGRDIALEAPTDDEDDKFSPIAYLSSDLSEPTKVLEAEQVTRLQSEGLETALGK
LDARSRRIVEARWLANDDGSGATLHTLADEFGVSAERIRQIESAALKKMKGALAAYV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgcaccttccgccctggttccagccggcagcagtgcactgggactcggcttc
agtggcaacctgggtaacctggatgcctacatttccgctgttaaccgtctgccgatgctg
acgcatgaagaagaagtctcactgggccgccgcctgaaggaaaacaacgacctgaaggca
gcggaaaaactggtgctgtcgcacttgcgcctggtggtatcgatcgcccgcggctacctg
ggttacggcctgccgcatgccgacctgatccaggagggcaatatcggcctgatgaaagcg
gtgaagcgcttcgacccggaccagaacgtgcgcctcgtgtcgtacgcgatgcactggatc
aaggccgagatgcacgagtacatcctgaagaactggcgcctggtgaaagttgccaccacc
aaggcccagcgcaagctgttcttcaacctgcgcagccacaagaccggcctggatgcgatg
acgccggaccagatcgacgcactggcgaaaacgctggatgtgaagcgcgaggaagtgatc
gaaatggaaacgcgcctgtccggccgcgacatcgccctggaagcgccgaccgacgatgaa
gacgacaagttctcgccgatcgcctacctgtcgtccgacctgtcggaaccgaccaaggtg
ctggaggcggaacaggtgacgcgcctgcagtccgaaggcctggaaacggcactgggcaag
ctggacgcgcgctcgcgccgcatcgtcgaagcacgctggctggccaacgacgacggctcc
ggcgccacgctgcatacgctggccgacgaattcggcgtctccgccgagcggatccggcag
atcgaatccgccgcgctgaaaaagatgaaaggcgcactggccgcctacgtataa
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