Pseudoduganella umbonata: FCL38_26460
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Entry
FCL38_26460 CDS
T06138
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
mum
Pseudoduganella umbonata
Pathway
mum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCL38_26460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mum02000
]
FCL38_26460
Transporters [BR:
mum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FCL38_26460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
AAA_25
nSTAND1
ATPase
Motif
Other DBs
NCBI-ProteinID:
QCP13586
LinkDB
All DBs
Position
6291873..6293576
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AA seq
567 aa
AA seq
DB search
MNPADDALLAVRGLRIAFRVDRHSTVEAVKGISFDVPRHATVALVGESGSGKSVSSLAVM
GLLPAESTLVDPASSIRFDGRDVLRLPAGERRALCGREIAMIFQEPMSSLNPVFTVGFQV
GEVLRRHMGMSRRQARARTLALLEEVGIPDPAVKIDAYPGQLSGGQQQRVMIAMAIACEP
KLLIADEPTTALDVTIQKQILALIARLQRERGMAVLFITHDLGLVGEIADHVIVMRHGEI
REAGPARQVLGAPRDPYTRALLHCRPSLDSRPVRLPVIDDYLKRESGRGPDSEPVPQRTR
GYGPDDDIILDVRNLRKSFWIREGLFGKREFQAVKDVSFQLPRGKTLGVVGESGSGKTTV
GLTLLRLHRATGGSALFDGRDLLALPERAFHPYKRRIQIIFQNPYASLNPRFTVGQILLE
PMRLHRIGADDAQRVAMALELLARVGMPAQAFHRYPHEFSGGQRQRIAIARCLTMQPEIL
VCDESVSALDVSVQAQVLNLLQDLQDEFALSYLFISHDLAVVKYISDRVMVMQGGAVVES
ADADELYRNPRHPYTRSLLSAFPRGVE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggccgatgacgcgctgctggcggtgcgcggcctgcgcatcgcgttccgggtc
gaccggcatagcacggtcgaagccgtgaaaggcatttcgttcgacgtgccgcgccatgcg
accgtggcgctggtgggggaatcgggcagcggcaagtcggtcagctcgctggcggtgatg
ggcctgctgccggcggagtccacgctggtcgacccggcgagcagcatccgcttcgatggc
cgcgacgtgctgcgcctgccggcgggcgagcggcgtgcgctgtgcggccgcgagatcgcg
atgatcttccaggagccgatgtcgtcgctgaaccccgtcttcacggtgggtttccaggtg
ggcgaggtattgcgccggcacatgggcatgagccggcggcaggcccgcgcccgcaccctg
gccctgctggaggaggtgggcatacccgatccggccgtgaagatcgatgcgtacccgggc
cagctgtccggcggccagcagcagcgcgtgatgatcgccatggcgatcgcgtgcgaaccg
aagctgctgatcgccgacgagccgaccaccgcgctggacgtgacgatccagaagcagatc
ctcgcgctgatcgcgcggctgcagcgcgagcggggcatggcggtgctgttcatcacgcac
gacctggggctggtgggcgagatcgccgaccacgtgatcgtgatgcggcatggcgagatc
cgcgaagcgggccccgcgcggcaggtgctcggcgcgccgcgcgacccgtacacgcgggcg
ctgctgcactgccggccgtcgctggattcccggccggtccggctgccggtgatcgacgat
tacctgaagagagagtcaggaagggggccggacagcgagccggttccgcagcgcacgcgc
ggctacgggccggacgacgacatcatcctggacgtgcgcaacctgcgcaagagcttctgg
atccgcgaggggctgttcggcaagcgcgaattccaggccgtgaaggacgtgtcgttccag
ctgccgcgcgggaagacgctgggcgtggtgggtgaatccggctcgggcaagacgacggtg
ggcctgaccctgctgcggctgcaccgcgccaccggcggcagcgcgctgttcgacgggcgc
gacctgctggcgctgccggagcgcgccttccatccctacaagcggcgcatccagatcatt
ttccagaatccctatgcctcgctgaatccccgtttcacggtcgggcagatcctgctcgaa
ccgatgcgtttgcaccgcatcggcgccgatgacgcgcaaagagtggcaatggcactggag
ctgctggcccgggtgggcatgccggcgcaggcattccaccgttatccgcacgagttcagc
ggcggccagcgccagcgcatcgccatcgcgcgctgcctgacgatgcagccggaaatcctc
gtctgcgacgaatccgtgtcggcgctggacgtgtcggtgcaggcccaggtgctgaacctg
ctgcaggacctgcaggacgagttcgcgctgtcctacctgttcatttcgcacgacctggcg
gtggtgaagtacatctcggaccgggtcatggtgatgcagggcggcgccgtggtcgagagc
gcggatgccgacgagttgtaccgcaacccccggcatccctacacgcgcagcttgttgtcg
gcgtttccccgtggcgtggagtaa
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