Pseudoduganella umbonata: FCL38_26505
Help
Entry
FCL38_26505 CDS
T06138
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mum03016
]
FCL38_26505 (truB)
Enzymes [BR:
mum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FCL38_26505 (truB)
Transfer RNA biogenesis [BR:
mum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FCL38_26505 (truB)
Prokaryotic type
FCL38_26505 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QCP13595
UniProt:
A0A4P8HYU6
LinkDB
All DBs
Position
6305154..6306110
Genome browser
AA seq
318 aa
AA seq
DB search
MTEEVKAARVKRVRDLVDGVLLLDKPVGLSSNDALIRTKRVLNAKKAGHTGTLDPFATGL
LPLCFGEATKFSQDLLEADKTYVTTVHLGVRTDTGDTEGQVADADPALDRDVATITVAEI
EAVLARFRGPIAQVPPMYSALKRDGKPLYEYARAGITLEREARNVVIHKLELLSYEAPFL
RLEATVSKGTYIRVLGEDIGAALGCGAHLNALRRTGVGALNADNMVTLEQVQGHAAPLSL
LAPVDALLSTFPRIELTAELSKRFLQGQRLPLGKEPGVQTPAPYEGRVRVYADGKLLGTG
LFEQWAILKPERLIAAAQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggaagtcaaggctgcccgcgtgaagcgggtacgcgacctcgtcgatggcgtc
ctgctgctcgacaagccggtcggcctgtcgtcgaacgatgcgctgatcaggaccaagcgc
gtgctgaacgcgaagaaggcgggccacaccggcacgctcgatccgttcgccaccggcctg
ctgccgctgtgcttcggcgaggccaccaagttttcgcaggacctgctcgaggccgacaag
acctacgtgacgaccgtgcacctgggcgtgcgcaccgatacgggtgacaccgaagggcag
gtagccgacgccgatcccgcgctggaccgcgacgttgccaccatcaccgtcgcggaaatc
gaagcggtgctggcgcgcttccgcggcccgatcgcgcaggtgccgccgatgtattcggcc
ctgaagcgcgacggcaagccgctgtacgaatacgcccgcgccggcatcacgctcgagcgc
gaggcgcgcaacgtcgtcatccacaagctggaactgctgtcgtacgaagcgccgttcctg
cggctggaagccacggtcagcaagggcacctacatccgcgtgctgggcgaggacatcggc
gccgcgctgggctgcggcgcgcacctgaacgccttgcggcgcacgggcgtcggcgcgctg
aacgccgacaacatggtgacgctggaacaggtgcaggggcacgccgcgcccctgtccctg
ctggcaccggtggatgcgctgctgtcgacgttccctcgcatcgaactcactgccgagctg
tcgaaacgcttcctgcagggccagcggctcccgctcggcaaggagcctggcgtgcagacg
ccggcgccctatgaaggccgcgtgcgcgtgtacgcggatgggaaactgctcggcaccggg
ctgttcgaacagtgggccatcctcaagccggaacggctgatcgccgccgcgcaatag
DBGET
integrated database retrieval system
