Pseudoduganella umbonata: FCL38_27655
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Entry
FCL38_27655 CDS
T06138
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mum03032
]
FCL38_27655 (gyrA)
03400 DNA repair and recombination proteins [BR:
mum03400
]
FCL38_27655 (gyrA)
Enzymes [BR:
mum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FCL38_27655 (gyrA)
DNA replication proteins [BR:
mum03032
]
Prokaryotic type
DNA Topoisomerases
FCL38_27655 (gyrA)
DNA repair and recombination proteins [BR:
mum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FCL38_27655 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QCP13785
LinkDB
All DBs
Position
6570784..6573492
Genome browser
AA seq
902 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFSMHESNYHYN
RPYVKCARVVGDTMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDAAAAM
RYTECRLDKIAGELLADIDKETVDFQPNYDGKEKEPTVLPTRVPNLLINGSSGIAVGMAT
NIPPHNLAEVISGALHVLANPDCTVDELIELIPAPDFPTGGTIYGVSGVRDGYRTGRGRV
VMRAKTHFEEYGKDGGRMAIIVDELPYQVNKKSLLERIAENVRDKKLEGISDIRDESDKS
GMRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDNQPKLMNLKDLLSVFLSHRR
EVVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPLAKSELMARAWDSSL
VREMLARTGDGGIVDINAFRPEHLPKHYGMQADGLYKLSDDQAQEILQMRLQRLTGLEQD
KIVNEYKDVMAQIADLLDILAKPARVTAIISDELTAAVTEYGAKDVRRSTIEHNATDLET
EDLITPQDMVVTLSHMGYMKAQPISEYRAQKRGGRGKQAMATKDEDWIDQLFIANTHDYI
LCFSNRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQDNEKITVVLPLSGENRTFPEDHYV
FMSTSLGTVKKTPLKDFSNPRKAGIIAVDLDEGDFLIGAALTDGKHDVMLFSDAGKAVRF
DENDVRPMGRTARGVRGMNLDEGQNVIALLVAENEQQTVLTATENGYGKRTPITEYTRHG
RGTKGMIAIQTTERNGKVVAATLVDPSDEIMLITTGGVLIRTRVSEIREMGRATQGVTLI
AVEDGTHLSGLQRIVEADADEVDALADAVDPATGTAPEAAAGAEPVDDTPADDTPADDTP
AE
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcaaaagaaacaatccccatttcactcgaagaagagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtgggccgcgccttgccggatgcacgcgatggc
ctgaagccggtacaccgtcgtgtgctgttctccatgcacgaaagtaattaccactacaac
cggccctacgtgaagtgcgcccgcgtggtgggtgacacgatgggtaagtaccacccgcac
ggcgatgcgtcgatctacgacacgctggtgcgcatggcgcaggacttctcgctgcgctac
acgctggtggatggccagggcaacttcggctcgatcgacggcgatgccgcggccgccatg
cgttacaccgagtgccgcctcgacaagatcgccggcgagctgctggccgacatcgacaag
gaaaccgtcgacttccagccgaactacgacggcaaggaaaaagagccgacggtgctgccg
acgcgcgtgccgaacctgctgatcaacggctcgtccggtatcgcggtcggcatggcgacg
aacattccgccgcataacctggccgaagtgatcagcggcgcgctgcacgtgctggccaat
ccggactgcacggtggacgagctgatcgaactgatcccggcgccggacttcccgaccggc
ggcacgatctacggcgtgtccggcgtgcgcgacggttaccgcacgggccgcggccgcgtc
gtcatgcgcgccaagacccacttcgaggaatacggcaaggatggcggccgcatggccatc
atcgtcgacgaactgccataccaggtgaacaagaagtcgctgctcgagcgtatcgccgag
aacgtgcgcgacaagaagctggaaggtatttccgacatccgcgacgagtccgacaaatcg
ggcatgcgcgtggtgatcgagctgaaacggggcgaagtaccggaagtggtgctgaacaac
ctgtacaagcagacccagttgcaggacacgttcggcatgaacatggtggcgctggtggac
aaccagcccaagctgatgaacctgaaggacctgctgtcggtcttcctgtcgcaccgccgc
gaagtggtcacgcgccgcaccgtgttcgagctgcgcaaggcgcgcgagcgcggccacgtg
ctggaaggcctggccgtggcgctggccaatatcgacgacttcatcgccatcatcaaggcg
gcgccgacgccgccgctggcgaagtcggagctgatggcgcgcgcctgggattcgtccctg
gtgcgcgagatgctggcccgcaccggcgatggcggcatcgtggacatcaatgcgttccgc
cccgagcacctgccgaagcactacggcatgcaggccgacggcctgtataaactgtccgac
gaccaggcgcaggaaatcctgcagatgcgcctgcagcgcctgaccggcctggaacaggac
aagatcgtcaacgaatacaaggatgtgatggcgcagatcgccgatctgctcgacatcctg
gccaagccggcgcgcgtgacggcgatcatcagcgacgagctgaccgccgccgtcaccgaa
tacggcgcgaaggacgtgcgccgttccacgatcgagcacaacgccaccgacctggaaacg
gaagacctgatcacgccgcaggacatggtggtcacgctgtcgcacatgggctacatgaag
gcccagccgatctccgaataccgcgcgcagaagcgcggcggccgcggcaagcaggccatg
gccaccaaggacgaggactggatcgaccagctgttcatcgccaacacgcacgactacatc
ctgtgcttcagcaaccgcggccggatgtactggctgaaggtgtgggaagtgccgcaaggc
tcgcgcaattcgcgcggcaagccgatcgtcaacatgttcccgctgcaggacaacgaaaag
atcaccgtggtgctgccgctgtccggcgaaaaccgcaccttcccggaagatcactacgtg
ttcatgtccaccagcctgggcaccgtgaagaagacgccgctgaaggacttcagcaacccg
cgcaaggccggcatcatcgccgtggacctggacgagggcgacttcctgatcggcgccgcg
ctgaccgacggcaagcacgacgtgatgctgttctccgatgccggcaaggcggtgcgcttc
gacgagaacgacgtgcgcccgatgggccgcacggcgcgtggcgtgcgcggcatgaacctg
gacgaaggccagaacgtgatcgcgctgctggtggccgagaacgagcagcagaccgtgctg
accgccaccgagaacggctacggcaagcgcacgccgatcaccgagtacacgcgccatggc
cgtggcaccaagggcatgatcgcgatccagaccaccgagcgtaacggcaaggtggtggcg
gccacgctggtcgatccgagcgacgagatcatgctgatcaccaccggcggcgtgctgatc
cgcacgcgtgtttccgagatccgcgagatgggccgcgccacccagggcgtcacgctgatc
gccgtcgaggatggcacgcacctgtcgggcctgcagcgcatcgtcgaggcggatgccgac
gaggtggatgccctggccgatgctgtcgatcctgcgacgggcacggcgcccgaggctgcg
gccggcgcagaaccggttgacgacacgccagccgacgacacgccagccgacgacacgcca
gcagagtaa
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