Pseudoduganella umbonata: FCL38_27700
Help
Entry
FCL38_27700 CDS
T06138
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mum03032
]
FCL38_27700
03036 Chromosome and associated proteins [BR:
mum03036
]
FCL38_27700
03400 DNA repair and recombination proteins [BR:
mum03400
]
FCL38_27700
DNA replication proteins [BR:
mum03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FCL38_27700
Chromosome and associated proteins [BR:
mum03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FCL38_27700
DNA repair and recombination proteins [BR:
mum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FCL38_27700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
CATASP
Par3_HAL_N_term
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QCP13792
LinkDB
All DBs
Position
6582556..6582861
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELINRLAERYSQLVAKDAEYAVKTILDAMTGALSAGQRIEIRGFGSFALNSRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKQLRERVDAMVGQPIIED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaactgatcaaccgcctggctgagcgttattctcagctggtggccaag
gatgcggagtatgccgtgaagaccattctcgacgcgatgaccggtgccctgtcggccggc
cagcgcatcgagatccggggcttcggcagctttgccctgaacagccggccaccacgcatc
ggccgcaatccgaagtccggcgacaaggtgatggtgcccgaaaagcgggtacctcatttc
aagccgggcaagcagttgcgcgagcgggtggacgcgatggtcgggcaaccgatcatcgag
gattga
DBGET
integrated database retrieval system
