Pseudoduganella umbonata: FCL38_28235
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Entry
FCL38_28235 CDS
T06138
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00521
Streptomycin biosynthesis
mum00523
Polyketide sugar unit biosynthesis
mum00541
Biosynthesis of various nucleotide sugars
mum01100
Metabolic pathways
mum01110
Biosynthesis of secondary metabolites
mum01250
Biosynthesis of nucleotide sugars
Module
mum_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FCL38_28235 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FCL38_28235 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FCL38_28235 (rfbC)
Enzymes [BR:
mum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FCL38_28235 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCP13882
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All DBs
Position
complement(6717877..6718422)
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AA seq
181 aa
AA seq
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MNVIPTPIDGLLIIEPTVFGDERGFFYESFNAQRFAELTGVQLPFVQDNHSRSARGVLRG
LHYQIQQAQGKLVRVTAGSVFDVAVDLRKSSSTFGQWYGLELSAENKRQFWIPPGFAHGF
TVTSEFAEFLYKTTDYYAPAYERSLLWNDPAVGVEWPVEGTPLLSAKDQKGLPLAEADVF
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcattcctaccccgatcgacggcctgctgatcatcgaaccgaccgtgttcggc
gatgagcgcggctttttctacgagagtttcaatgcccagcgctttgccgagctgaccggc
gtgcagctgcctttcgtccaggataaccattcgcgctcggcgcgcggcgtgctgcgcggc
ctgcactaccagatccagcaggcgcagggcaagctggtgcgcgtgacggccggcagcgtg
ttcgacgtggccgtcgatctgcgcaagagctcgtccacattcggccagtggtatggcctg
gagctgtccgcggagaacaagcggcagttctggataccgccgggtttcgcacacggcttc
accgtcaccagcgagttcgccgaattcctgtacaagacaaccgactattatgcgccggcg
tacgaacgctcgctgctgtggaacgacccggccgtcggcgtcgaatggccggtcgaaggc
acaccgctgctgtcggccaaggaccagaaaggcctgccgctggctgaagcggacgtgttc
gaatga
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