Pseudoduganella umbonata: FCL38_28715
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Entry
FCL38_28715 CDS
T06138
Name
(GenBank) HAMP domain-containing protein
KO
K13487
methyl-accepting chemotaxis protein WspA
Organism
mum
Pseudoduganella umbonata
Pathway
mum02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCL38_28715
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
CHASE3
HAMP
Cortex-I_coil
TMF_TATA_bd
DUF1664
BLOC1_2
DUF5877
HAMP_2
NPV_P10
PQQ_syn_pqqF_N_2
Motif
Other DBs
NCBI-ProteinID:
QCP13952
LinkDB
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Position
complement(6824278..6826092)
Genome browser
AA seq
604 aa
AA seq
DB search
MIQNMSIKNKLYAGFGAILAIILILLTIAYNNFAELRKANEWDRHTMQVVNAIDKVSLAV
LEVQVEARGYYLTGTPARLAKVREGITHLPATITTLQKLVVDNPAQASRAARLESLTLSW
VRDVIEPQTAQRQQLGNTLGAADTIGRLPQFQQASPAVAGVHALLDEARKEENALLAQRS
EAAAELRREMNLVLVAGGAVSVLLGMVIVWALTRAIMGPLTNLTNVVGRIAGGDQGARVE
IVTRDELGQVGQELNRMAQSIQDSQQRERATTDELRAKVDSLLAVVSRAASGDLTGKVDV
TGSDTIGQLGHGLARMFDNLRLLLNNVQKAGIQVTTSATEIAASAKQQEATGVEQAQTSV
EVLSTTKEISSNTSQLLKTMEDATAVADYTTTATAEAQENLRRMDATMQNMVSATDSINA
KLAALSEKASNINSVLTTITKVADQTNILSLNAAIEAEKAGEAGRGFAVVATEIRRLADQ
TSVSTWDIEQMLKEMQSAVSASVMGMDKFSEEIRRNVGEVRAVTDHLSGMMDQVRKLAPQ
FDAVLQGMQAQAVGAQQISETMMQLNDATQQTVESLKATSEAVHQLQYAASDLQTSVATF
AVNV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaacatgagcatcaagaacaagctgtacgccggattcggcgccattctcgcg
atcatcctgatcttgctaacgattgcctacaacaacttcgcagagctgcgcaaagccaat
gaatgggaccggcacaccatgcaggtggtcaacgccatcgacaaggtcagcctggccgtg
ctggaagtccaggtcgaggcgcgcggctattacctgacgggtacaccggcccggctggcc
aaggtgcgcgaagggattacgcatttgcccgcgaccatcaccacgctgcagaaactggtg
gtggacaatccggcgcaggcgagccgcgcggcccggctggaaagcctgacgctcagctgg
gtgcgcgatgtgatcgagccccagacagcgcagcgccagcagctgggcaatacactgggc
gcggccgacacgatcggccgcctgccccagttccagcaggccagtccggccgttgcaggc
gtgcacgccctgctggacgaagcgcgcaaggaagagaatgcgttgctggcgcagcgctcc
gaggcggccgccgagttgcgccgcgaaatgaacctggtactggtggcgggcggcgcggtg
tcggtcctgctgggcatggtcatcgtctgggcgctgacacgggccatcatgggcccgttg
accaacctgaccaatgtggtgggccgcatcgccggcggcgaccagggcgcccgcgtcgag
atcgtcacgcgcgacgaactgggccaggtgggccaggaactcaaccgcatggcgcaatcg
atccaggacagccagcagcgcgaacgcgccaccaccgacgaactgcgtgccaaggtcgat
tcgctgctggccgtggtatcgcgcgcggcttccggcgacctgaccggcaaggtcgacgtc
acgggcagcgacaccattggccagctcggccatggcctggcgcgcatgttcgacaacctg
cgcctgctgctcaacaacgtgcagaaggccggcatccaggtcactacgtcggccaccgaa
atcgccgcttcagccaagcagcaggaagccaccggcgtcgagcaggcgcagaccagcgtc
gaggtgctgtcgaccacgaaggaaatttcgtcgaacacgtcgcagctgctgaagacgatg
gaagatgccaccgccgtggccgactacacgacgacggccaccgccgaggcccaggaaaac
ctgcgccgcatggatgcgacgatgcagaacatggtctcggccaccgattcgatcaatgcc
aagctggctgcgctgtccgagaaggcatcgaacatcaacagcgtgctgacgacgatcacg
aaggtggcggaccagaccaacatcctgtcgctgaacgccgcgatcgaggccgagaaggcc
ggcgaggcaggccgcggcttcgcggtggtggccaccgaaatccgccggctggcggaccag
acctcggtatccacctgggacatcgagcagatgctcaaggagatgcagtccgccgtgtcg
gccagcgtgatgggcatggacaagttctccgaagagatccgccgcaacgtgggcgaggtg
cgcgccgtcaccgaccacctgtccggcatgatggaccaggtgcgcaagctggccccgcag
ttcgatgccgtgctgcagggcatgcaggcgcaggccgtgggcgcgcagcagatctccgag
acgatgatgcagctgaacgatgccacgcagcagaccgtcgagtcgctgaaggccaccagc
gaagcggtgcaccagttgcagtacgcggccagcgacctgcagacctcggtggccaccttc
gcggtcaacgtctga
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