Pseudoduganella umbonata: FCL38_28875
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Entry
FCL38_28875 CDS
T06138
Name
(GenBank) RNA helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
mum03029
]
FCL38_28875
Enzymes [BR:
mum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FCL38_28875
Mitochondrial biogenesis [BR:
mum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FCL38_28875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SUV3_C
DEAD
Suv3_C_1
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QCP13984
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Position
6868776..6870713
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AA seq
645 aa
AA seq
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MTEELDDDRLSNELGLAERGVALMKLEGRVFLRFDGTADAADLRVPYALVPAQGVLAKPS
KWRKLDADARAALIRERSTDRALRELHDSVEAFVEELAGECEEFGLAPMDFLHSLADVQT
SEPATVVFDRIRQRLGHAVERQREEQHAERTRQSINLAEYPASFEVARRLPRKFVALLGP
TNSGKTHKAMEALAKAASGVYLAPLRLLALENYERLLEVSRHGKPLAVSLVTGEERRIAE
DATHVASTVEMLDTRTPVDVAVIDEIQMLADRDRGAAWTAAVCGAPARTVYLVGAPEARR
AVEALAERLECPIEVHVMKRKGPLSMEPGPVRRVKNLRPGDALIAFSRRDVLMWRDMVAE
MGHLVATVYGNLSPEVRRAQAQRFRDGEADIVVGTDAIAMGLNMPIQRIVMTSTVKFNGV
EEEEIPAPLARQIAGRAGRYGIHEEGLVAGYDADSHEVMRSLLKEKPVPLNTSGFAVAPT
LEHLHRIAAVTQETSLAKLLKRFIHNIDVPDGFFYPRITEDQMERAQWLDTLPLSVADKF
ALSLVPVSTKVLALQRAWEHWCVALSKKRITRLQADDHQLHYMTLQEVEDTCRLYSAYAW
LGYRLPDYFPDIELALELSRAASERVDSMLQDQNTSSRRRHHRRR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagaactcgatgacgatcggctgagcaacgagctcggcctggcggagcgcggc
gtcgcgctgatgaaactggagggcagggtattcctgcgcttcgacggcacggccgatgcg
gccgacttgcgcgtaccgtatgcgctggtgccggcgcagggcgtgctggccaagccgtcg
aaatggcgcaagctcgatgccgacgcgcgtgccgcgctgatccgcgaacgctcgaccgac
cgggcactgcgcgaactgcatgacagcgtggaggcctttgtcgaagaactggccggcgaa
tgcgaggaattcggcctggcgccgatggatttcctgcattcgctggccgatgtgcagacg
tccgaaccggccacggtcgtgttcgaccgtatccgccagcgcctgggccacgcggtggag
cggcagcgcgaggagcagcatgccgagcgcacccgccagagcatcaacctggccgaatat
cccgcttcgttcgaggtggcacggcggctgccgcgcaagttcgtcgcgctgctgggcccc
accaattccggcaagacccacaaggcgatggaagcgctggccaaggccgccagcggcgtg
tacctggcgccgctgcggctgctggcgctggaaaactacgaacgcctgctggaggtaagc
cgccacggcaagccgctggcggtcagcctggtcacgggcgaggagcgcaggatcgcagag
gatgccacccacgtcgccagcacggtcgagatgctcgatacgcgcacgccggtcgacgtg
gcggtgatcgacgaaatccagatgctggcggaccgcgaccgtggcgccgcctggacggcc
gccgtgtgcggcgcgccggcccgtaccgtgtacctggtgggcgcgccggaagcgcgccgc
gcggtcgaggcgctggccgaacggctcgaatgcccgatcgaggtgcacgtcatgaagcgc
aaggggccgctgtcgatggagcccgggccggtgcgcagggtgaagaacctgcggccgggc
gatgcgttgatcgccttctcgcggcgcgacgtgctgatgtggcgcgacatggtggccgag
atgggccatttggtggccaccgtgtacggcaacctgtcgcccgaggtgcggcgtgcgcag
gcgcagcgcttccgcgacggcgaagccgacatcgtggtcggcaccgatgcgatcgcgatg
ggcctgaacatgccgatccagcgtatcgtgatgacgtccacggtgaagttcaacggcgtc
gaggaagaggaaatcccggcgccgctggcacgccagatcgccggccgggcggggcgctac
ggcatccacgaggaaggcctggtggccggctacgacgccgacagtcacgaagtgatgcgc
tcgctgctgaaggaaaagccggtgccgctcaataccagcggcttcgcggtggcgcccacg
ctggaacacctgcaccgcatcgccgccgtcacgcaggagacctcgctggccaagctgctg
aagcgcttcatccacaacatcgatgtgccggacgggttcttctacccgcgcatcaccgaa
gaccagatggagcgcgcgcaatggctggacacgctgccgctgtcggtggccgacaagttc
gcattgtcgctggtgcccgtgtcgaccaaggtactcgcgctgcagcgcgcttgggagcac
tggtgcgtggcactgtcgaagaagcgcatcacgcggctgcaggcggacgatcaccagctg
cattacatgacgctgcaggaagtcgaggatacctgccgcctctactccgcatatgcctgg
ctgggctaccgcctgccggactatttcccggacatcgagctggcgctggagctgtcgcgc
gcggcatccgaacgggtcgattcgatgctgcaggaccagaacacctcgtcacggcgccgg
catcaccggcggcgctga
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