Pseudoduganella umbonata: FCL38_30210
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Entry
FCL38_30210 CDS
T06138
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCL38_30210 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mum01007
]
FCL38_30210 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mum03016
]
FCL38_30210 (serS)
Enzymes [BR:
mum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FCL38_30210 (serS)
Amino acid related enzymes [BR:
mum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FCL38_30210 (serS)
Transfer RNA biogenesis [BR:
mum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FCL38_30210 (serS)
Prokaryotic type
FCL38_30210 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
SPC25_N
HmpF
Motif
Other DBs
NCBI-ProteinID:
QCP14213
UniProt:
A0A4P8HW23
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All DBs
Position
7156868..7158163
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AA seq
431 aa
AA seq
DB search
MIDIQLLRKDIDTVAARLATRKFQLDVAGFTALESERKAIQTRTEELQGKRNALSKQIGM
LKGKGEDTSAVMAEVAGIGDELKNNEGALAALQHKLQAFLQAVPNLPHESVPVGTDESGN
VEVRKIGTPRSFDFEVKDHVDVGAALGLDFDTATKLTGSRFSVMKGGIARLHRALAQFML
DTHTDKHGYTECYTPYMVNAESLLGTGQLPKFEADLFSVKKGGVEGEGETFYLIPTSEVT
LTNTVRDEIIAADALPLKMTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIAHPDAS
YQALDEMVGHAEAILQALGLPYRVLSLCTGDMGFGAAKTFDLEVWLPAQNTYREISSLSN
CEAFQARRMQARFRNAQGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSVEIPEVLRGY
MGGLTHLKASQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgattgacatccaacttctccgtaaagacatcgacaccgtggccgcccgcctggcgacc
cgcaagttccagctggacgttgccggattcaccgccctggaatccgagcgcaaggcgatc
cagacgcgtaccgaggaactgcagggcaagcgcaatgcgctgtccaagcagatcggcatg
ttgaagggcaagggagaagacacctccgccgtgatggcggaagtagccggcatcggcgac
gagctgaagaacaacgaaggcgcgctcgccgccctgcagcacaagcttcaggcttttctg
caagccgttccgaacctgccgcatgaatcggtgccggtcggtaccgacgaatcgggcaac
gtggaagtacgcaagatcggcacgccgcgcagcttcgacttcgaggtgaaagaccacgtg
gacgtcggcgccgcgctgggcctggacttcgacaccgcgaccaagctgaccggctcgcgc
ttctccgtcatgaagggaggcatcgcgcgcctgcaccgcgcgctcgcccagttcatgctc
gacacgcacaccgacaagcacggctacaccgagtgctacacgccctacatggtcaacgcc
gagtcgctgctcggcaccggccagctgccgaaattcgaagccgacctgttttcggtgaag
aagggcggcgtcgaaggcgagggcgagaccttctacctgatccccacgtcggaagtgacg
ctgacgaataccgtgcgcgacgaaatcatcgcggccgacgcgctgccgctgaagatgacg
gcgcatacgccatgcttccgctcggaagcgggcagctacggccgcgacacgcgcggcatg
atccgccagcaccagttcgataaagtcgagatggtgcagatcgcccacccggacgcttcg
taccaggcgctggacgaaatggtgggccacgccgaagcgatcctgcaggcgcttggcctg
ccgtaccgggtgctgtcgctgtgcaccggcgacatgggctttggcgccgcgaagaccttc
gacctggaagtatggctgccggcgcagaacacctaccgcgaaatctcgtcgctgtcgaac
tgcgaagcgttccaggcccgccgcatgcaggcccgcttccgcaatgcgcagggcaagccg
gaactggtgcacacgctgaacggctccggcctggccgtgggccgcacgctggtggccgtg
ctggaaaactaccagcaggccgatggcagcgtggaaatcccggaggtcctgcgcggctac
atgggcggtcttacgcacctgaaagcttcgcagtga
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