Pseudoduganella umbonata: FCL38_31015
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Entry
FCL38_31015 CDS
T06138
Name
(GenBank) response regulator
Organism
mum
Pseudoduganella umbonata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
PAS
PAS_9
Hpt
PAS_4
PAS_8
HAMP
PAS_3
Diguanyl_cycl_sensor
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QCP14355
LinkDB
All DBs
Position
7370176..7373643
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AA seq
1155 aa
AA seq
DB search
MIRRANVLHTLRDAWRRDIVLRLAVSIFLAVALSTAAYTTYAVRTLHAEAELQLQERSER
LVTVLSQALARPLFDINGAAITSVVDAMRATPEVLMLRVLAPNGTELAGFGTGKYGAASA
ITVHRDISFQDGARNYKVGAIDLTYSRRETDQALQRQLLNALMVNLLLALTIVGSVFVVA
RKAVRPFGDIQKSLEKLAQGKTDIQLSGIGRADQVGRLSIAVRSFRDTLTRLRYAESELR
ELNGDLEQKIDTRTQELKRTIAAARDSERKLRAIVDTALDAVVNMDRNGRVVGWNRQAEM
IFGYARDEALGQQLDTLIIPPRYRDDHRKGMARYLAGDGPGEVLDRRIEVEALHADGTEF
PIELSITRIDLDAGEFEFCGFIRDISERREREQKLVAANVRAEAANIAKSEFLANMSHEI
RTPMSAIIGMAYLALRTDLNTKQHDYVSKIHRAALALLGIINDILDFSKIEAGRLEVEQV
PFFLDEVLANVASVTSQRAAEKQLEYLFNVPPSIPRHLVGDPLRLGQVLINLVNNAVKFT
PQGELELCCTQMPSPGPAHGAGADRVVLRFSVRDTGIGMPEEQMGKLFRAFNQADGSTSR
QFGGTGLGLSISQQLVRLMGGSIRVESEQGRGSVFSFALEFGLSGQPERSPVVPAALNNA
RVLLVDDSPVALEVLGEAARALPLRVQTASSGAEALAGVVAADAAADPYALVLTDWQMPG
MDGIELARRVAAAPLERRPGMVLLTAFGREEVQREAEDAGFVGYLFKPIGQSVLVDTLVA
LFSPPRRHGRPVDAGKPGMTGRVLLVEDNPVNQQIAAELMGIQGIAVEFAGNGREALDRL
AQVGPGHYDLLLMDLEMPLLDGHETTLELRRDRRFDGLPVIAMTAHALADVRERCLAEGM
QDYVTKPIDPDMLYATLARWLGRAMPPVAPRPPRLLRILGQDGLPLLPGIDTARGLRHVA
GNETLYLQLLDRFRNSQRDAANEVATELLHCERDAARKRAHTLRGVAGNVGANAVEAAAR
AIEELLDGGEVPAATLVEELSGALRTAIAGLDAHFATTPGAGGEAGTGKAGAVSGAEEGT
AAEVQAEVQAKAALAKLRELLAAYSGDSNDYFAGARAALVAVLSPPVLERVAAHIASYEF
DAARQALDAAAPETP
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
ttgatacgacgggcgaatgtactgcacaccctgcgggatgcctggcggcgcgacatcgtg
ctgcgcctggctgtatcgatcttcctggccgtcgcgctgtccacggccgcctacaccacc
tatgccgtgcgcacgctgcacgccgaggccgagctgcaactgcaggagcgctccgagcgg
ctcgtgacggtgctgtcgcaggcattggcgcggccgctgttcgacatcaacggcgcggcc
atcaccagcgtggtcgacgcgatgcgcgccacgccggaagtgctgatgctgcgcgtgctg
gcgccgaacggcaccgagctggccggcttcggtaccggcaagtacggcgccgccagcgca
atcaccgtgcaccgcgacatcagcttccaggatggcgcccgcaactacaaggtgggtgcg
atcgacctcacgtattcgcggcgcgagaccgaccaggccctgcagcggcagctgctgaac
gcgctgatggtcaacctgctgctggcgctgacgatcgtcggctcggtcttcgtggtggcc
cgcaaggccgtgcggccgttcggcgacatccagaaatcgctggaaaagctcgcccagggc
aagaccgatatccagctttccggcatcggccgcgccgaccaggtgggccgcctttccatc
gcggtgcgcagcttccgcgacacgctgacccggctgcgctatgcggaaagcgaactgcgc
gagctgaacggcgacctggaacagaagatcgacacgcgcactcaggaactgaagcgcacc
atcgccgcggcgcgcgacagcgaaaggaagctgcgcgcgatcgtcgataccgcgctcgat
gccgtcgtcaacatggaccgcaacggccgcgtggtgggctggaaccgccaggccgaaatg
atcttcggctacgcgcgcgacgaagcgctgggccagcagctcgacacgctcatcattccg
ccgcgctaccgcgacgaccaccgcaagggcatggcacgctacctggccggcgacggcccg
ggcgaagtgctggaccggcgtatcgaggtcgaggcgctgcacgcggacggcaccgagttc
cccatcgaactgtcgatcacgcgcatcgacctcgatgccggcgagttcgagttctgcggc
ttcatccgcgacatctccgaacggcgcgagcgcgaacagaagctggtggccgccaatgtg
cgggcggaggcggccaacatcgccaagtccgaattcctggccaacatgagtcatgagatc
cgcacgccgatgagcgcgatcatcggcatggcctacctggcgctgcgcaccgacctgaac
accaagcagcacgattacgtcagcaagatccaccgcgccgcgctggcgctgctgggcatc
atcaacgatatcctggatttttcaaagatcgaggcgggccgcctggaagtcgagcaggtg
ccgttcttcctggacgaggtactggccaacgtggccagcgtgaccagccagcgggcggcg
gaaaagcagctcgaatacctgttcaacgtgccgccatcgattccgcgccacctggtgggc
gacccgctgcggctggggcaggtgctgatcaatctcgtcaacaacgccgtcaagttcacg
ccgcagggcgaactggaactgtgctgcacgcaaatgccgtcgccggggccggcccacggg
gcgggcgcggaccgggtcgtgctgcgcttctccgtgcgcgacacgggcatcggcatgccg
gaagagcagatgggcaagctgttccgcgccttcaaccaggccgacggctccacgtcgcgc
cagttcggcggcaccggcctgggcctgtcgatctcgcagcaactggtgcggctgatgggc
ggttcgatccgcgtcgagagcgagcagggcaggggttcggtcttttcgttcgcgctggaa
ttcggcctgtccgggcagccggagcgctcgccggtggtgccggccgcgctgaacaacgcc
cgcgtgctgctggtggacgacagcccggtggcgctcgaagtgctgggcgaggcggcgcgt
gcgctgcccctgcgggtacagaccgcgtcgtccggtgccgaggcactggccggcgtggtg
gccgccgacgcggccgccgacccgtatgcgctggtgctgaccgactggcagatgcccggc
atggacggcatcgagctggcgcgccgggtcgccgccgcgccgctggaacggcggccgggc
atggtgctgctgacggcattcggccgcgaggaggtgcagcgcgaggcggaagatgcgggc
ttcgtcggctacctgttcaagccgatcgggcaatcggtgctggtcgatacgctggtggcg
ctgttctcgccgccgcgccggcacggccggccggtcgatgccggcaagcccggcatgacg
ggccgcgtgctgctggtggaagacaatcccgtcaaccagcagatcgccgccgagctgatg
ggcatccagggcatcgcggtggagttcgccggcaacggccgcgaggcgctggaccggctg
gcgcaggtgggccccggccactacgacctgctgctgatggacctggaaatgccgctgctc
gatggccatgaaaccacgctggaactgcgccgcgaccgccgcttcgacggcctgcccgtc
atcgccatgacggcccacgcgctggccgacgtgcgcgaacgctgcctggccgagggcatg
caggattacgtcaccaagccgatcgacccggacatgctgtatgccacgctggcgcgctgg
ctgggccgggcaatgccgccggtggcgccgcggccgccgcgcctgctgcgaatattgggc
caggatggcctgccgctgctgccggggatcgacaccgcgcgcggcttgcgccacgtggcc
ggcaacgagacgctgtacctgcaattgctggaccggttccgcaactcgcagcgcgatgcc
gccaatgaagtggcgaccgagttgctgcactgcgaacgcgacgccgcccgcaagcgcgcc
cacacgctgcgcggcgtggccggcaacgtgggcgcgaacgccgtcgaagcggccgcccgg
gccatcgaggagctgctcgacgggggcgaggtgccggcggccaccctggtcgaggaactg
agcggggcgctgcgcaccgccattgccggcctggatgcccatttcgccaccacgccgggc
gccggcggcgaggccggcaccggtaaagcgggcgccgtgtccggagcggaggagggaacg
gcggcggaggtgcaggcagaggtgcaggcaaaagcggcgctggccaagctgcgcgaactg
ctggctgcgtacagcggcgacagcaatgactattttgccggcgcgcgcgcggcgctggtg
gccgtgctgtcgccgccggtgctggagcgggtagccgcgcacatcgccagctatgaattc
gacgcggcgcgccaggcgctcgacgccgcagctccggagacaccatga
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