Meriones unguiculatus (Mongolian gerbil): 110539372
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Entry
110539372 CDS
T05884
Symbol
Cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04115
p53 signaling pathway
mun04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110539372 (Cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
110539372 (Cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mun04121
]
110539372 (Cop1)
Enzymes [BR:
mun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110539372 (Cop1)
Ubiquitin system [BR:
mun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110539372 (Cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110539372 (Cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
zf-C3HC4
Beta-prop_TEP1_C
zf-RING_2
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
110539372
NCBI-ProteinID:
XP_060220513
LinkDB
All DBs
Position
11:80462591..80580150
Genome browser
AA seq
735 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAATLVSGGAAPAAGSGG
LSGPGRPVLVAAAVSGSGSASGGGAVSAGLSRLSCAARPSAGVGGSSSSLGSSSRKRPLL
APLCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV
VDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLA
NVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV
EEMSGLYSPVSEDSTVPQCEAPSPSHSSIIDSTEYSQPPGFSGTSQTKKQPWYNSTLASR
RKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASD
LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCI
SWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDA
KVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFK
GHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIA
CGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVL
IAANSQGTIKVLELV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtagccgccaggccggctcgggttccgcagggacgagccccggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttgtcctcgtctccgtcgccgccttccgtc
gcggcctcggcggcgacgctggtgtccggcggggcggctccggccgcaggctcgggcggc
ctcagcggcccgggccggcctgtgctggtggcggccgcggtgtctggcagcggcagcgcg
agcggcggcggggcggtgtccgcgggcctgtcccggctcagctgcgcggccaggcccagc
gccggagttggaggaagcagctccagcctcggcagcagcagtaggaaacgacctctgctc
gccccgctctgcaacgggctcctcaactcctacgaggacaaaagcaacgacttcgtctgc
cccatctgttttgacatgattgaggaggcatacatgacaaaatgtggccacagtttttgc
tacaagtgtattcatcagagtttggaggacaataatagatgtcccaagtgtaattatgtt
gtggacaatattgaccatctctatcctaatttcttggtgaatgaacttattctcaaacag
aagcaaagatttgaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggg
cataggtggcagatatttcaagatttgctaggaactgatcaggataaccttgatctggcc
aatgtcaacctcatgttggaattactagtgcagaagaagaaacaactggaagccgaatca
catgcagctcagctacagatccttatggaattcctcaaggttgcaaggagaaataagaga
gagcaattggaacagatccagaaggaactgagtgttttggaagaggatattaaaagagtg
gaagaaatgagtggcttgtactctcctgtcagtgaagatagcacagtgcctcaatgtgaa
gctccttctccatcacacagtagtattattgattccacagaatatagtcaacctccaggt
ttcagtggtacttctcagacaaagaaacagccttggtataacagcacattagcatcaaga
cgaaagcgactcactgctcattttgaagacttagagcagtgttatttttctacaaggatg
tcccgtatctcagatgacagtagaactgcaagccagttagatgaatttcaggaatgtttg
tccaagtttactcgatacaactcagtaagaccattggccacattgtcatacgctagtgac
ctctataatggttccagcatagtttctagtattgaatttgaccgggattgtgactatttt
gcaattgctggggttacaaagaagattaaagtctatgaatatggcacagtcatccaggat
gcagtggatattcattaccctgagaatgagatgacctgcaattccaaaatcagctgtatc
agttggagtagttaccataagaaccttctagccagcagtgattatgaaggcactgttata
ttatgggatggattcacaggacaaaggtcaaaggtctatcaggaacatgaaaagaggtgt
tggagtgttgactttaatctgatggatcctaaactcttggcttcaggttctgatgatgca
aaagtgaagctctggtctaccaatttagacaattcagtggcgagcatcgaggcaaaggct
aatgtgtgctgtgtgaaattcagcccctcttccagataccatttggcttttggctgtgca
gatcactgtgttcactactacgatcttcgtaacactaaacagccaataatggtgttcaag
ggacatcgaaaagcagtctcttatgccaagtttgtgagtggcgaagaaattgtctctgcc
tcaacagacagccaactaaaactatggaatgtggggaaaccatactgtctgcgttccttc
aagggtcatattaatgaaaaaaacttcgtaggtcttgcttccaatggagattatatagct
tgtggaagtgagaacaactccctctacctgtactataaaggactttctaagactttgcta
acttttaagtttgacacagtcaagagtgttctggacaaagaccggaaagaagatgacaca
aatgaatttgtcagtgctgtgtgttggcgggcactatcagatggggagtccaatgtactg
attgctgctaacagccagggtacaattaaggtgctagaattggtataa
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