Meriones unguiculatus (Mongolian gerbil): 110540813
Help
Entry
110540813 CDS
T05884
Symbol
Ddx60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110540813 (Ddx60)
Enzymes [BR:
mun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110540813 (Ddx60)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
110540813 (Ddx60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
110540813
NCBI-ProteinID:
XP_060237823
LinkDB
All DBs
Position
4:54813196..54917067
Genome browser
AA seq
1711 aa
AA seq
DB search
MEEYCTELLENMSQLILENMAKADFSSLLNDFVESEFFLIDGDSLLVTCVCESSLKSGQS
LHFFYLVERYLSDVINKGGQFAVVFFKDAEYAYFNVPKLVTLRTALILHLQKNTTIDVWT
KFSGCLTKEWNNCLDQRCPYFLILADEGLNDQQTHLFNFTAIQSWAAKVNVVLFSGQTSD
ILRLYAYFMQSSYTKQMFYMENGKKIVMVYKTLIKRLEKWRDKALTALFGDLKFNNMVGE
ACETVSLLKQVWPEGSDIRRVLCAASCSLSLDMYHCFLESREKEASQQTFEVKQKKDTCL
TLNDVEDFCKLHCLSVAFLLHLPLSQRARSRFITCKWIQDLKTVFKMKNWCEYFILSNTH
MFESWSLNFLHLSDLSDEPLLKNIAFYYEKENAEGLDLNVGDVIMKEYVQLWDTVSKLVR
KFDVGEPFPVRTTKLHFLQKTPSPIKESSQETMPNLGFIPLSCTLVDEFTGDILKDLPFL
KRDDPIVTSLVKYKEFDELVHWHSHRPLSDDYDRTKANFNEQSRDPYYLRGIQKYHVFQR
FYGNSLDSVSSKLITTQGAKPKKDCFKSKSSKTHETKADIIARENKKRLLAKEEQKEEQR
WNSLSFYIEEEMKKNLNSGMKKLEEFLKSCKSNSVKFQAEKVGLNVCLKVWKDHCRAEGE
TTKDLSKAVGMMKRIHSLLDKHSELLQEADQKLIARCLMYLGFDELANSLYATQDAADDI
KMRKKNKYSVGIGPARFQLQYMGHYLIREERKDPDPRVQDFIPDTWQRELLDVVDNYESA
VIVAPTSSGKTYASYYCMEKVLKESDEGVVVYVAPTKALVNQVAATVQHRYTKIMPAGEV
VCGVFTREYRHDALNCQVLVTVPACFEILLLAPHRQNWVKRIRYVIFDEVHCLGGEIGAE
IWEHLLVMIRCPFLALSATISNPQHLTEWLQSVKRYWKEVDSAMEKGTFSKRSCGSRGSY
HKERVQARQSYKVRLVLYGERYNDMEKYLCSVRQGDVCFDHFHPCAALTVDHIEKYGFPS
DLAFSPRESIQLYDTMLQVWERWPQAQNLCPETFTHFKNKIVIKKLDARKYEESLKEEFT
NWIKNGNEEEARMVLKKLSPNFQEHRGRMLDFFPRLVEKLREMDKLPAIFFLFRLGDVEE
CAEDACEFLENKQEEKRPPKADKEAHIVANKLRKVRKSLEKQKILNEKSQKSPRRLDQAL
MSEAEHNYLLKSLEKNLEIPQDCTYADQKAIDDETLRMVFSRVKFERKGDRLKILARRGI
GYHHSSMSAKEKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVFAQNSVYLDALNFRQ
MSGRAGRRGQDLLGDVYFFDIPLPKVEKLIKSKVPELRGQFPLSISFILRLMLLASKADD
PEDGKAKALSVLKHSLLSFKQPRVTDMLKLYFLYSLQFLVKQGHIDQEGNPTGFAGLVSH
LHYHEPSNLIFVSFLVKGLFHKLCQPISRDPKRFSEDVMEKLVLVLANLFGRRYFPAKFG
DANTKFYQSKVFLDDLPEDFSDALLEYNMQVTEDFASFLLIVSQLADMKQEYQLPLSKIE
FTGKECEDSPLVSHLMNCVEGRVAVSPFVCLSGNFDVDLLHPGVPDHVILHTIGINHKQA
PVLWPHRLDNQGRKMPLNAYALDFYKHGSLLGLVQDNRLHEGDAYYLLKDFFLTIKSISV
SLRELCENEDDNVVLAFEQLSESFQAKFEKV
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatattgcacagaacttttagagaatatgtcacaattaatcttggaaaatatg
gcaaaggctgacttttccagcttactcaatgattttgttgaatctgagttttttctgatt
gatggagactcattacttgtcacatgtgtgtgtgagagctcactgaagtcagggcagagt
cttcatttcttctacctggtggagcgctacctgtcagatgtgattaacaaaggagggcaa
tttgctgtggttttcttcaaggatgctgaatacgcatacttcaatgtccctaaacttgtt
accctgaggactgctttaatcctgcatcttcagaagaataccaccattgatgtttggact
aagttttctggctgcttgacaaaagagtggaataattgcttggatcagaggtgcccctat
ttcttgatccttgccgatgaaggtctgaacgaccagcaaacacaccttttcaactttaca
gccattcagtcttgggcagcaaaggtcaacgttgtgctcttctcagggcaaacgtctgac
atcctccggctttatgcgtactttatgcaaagctcttatacaaagcagatgttttacatg
gagaatgggaagaagattgtgatggtttacaaaaccctgattaaacggttggaaaaatgg
agagacaaggctttaacagctctgtttggagatttaaaattcaataatatggtgggagag
gcatgtgagactgtatctctgcttaagcaagtctggccggagggatctgacatccgacgt
gtcctttgtgccgcctcatgctccctgtccttggacatgtaccactgctttttagagagc
agagagaaggaagcctcccagcagacgttcgaagtcaaacagaaaaaagatacttgctta
accctgaatgacgtggaagacttttgtaagctacattgcctcagtgtggcttttctactc
catttacctctctcccagagagctcgctcaagattcatcacttgtaaatggattcaggac
ctcaagactgtctttaaaatgaaaaactggtgtgaatatttcatcctaagtaacacgcac
atgtttgaatcttggagtctgaattttcttcacctttctgacttaagtgatgagcctttg
ttgaagaatattgctttttactatgaaaaggaaaatgcagaaggcttggatttgaatgta
ggagatgtcatcatgaaagagtatgtacagttgtgggacactgtgtcaaagttggtcaga
aagtttgatgtgggagaaccatttcctgtgagaacaacaaagcttcattttcttcaaaag
accccatcaccaatcaaagaaagttctcaggagacaatgccaaatttgggttttattcct
ctgtcatgtactttggttgatgaatttactggagacattttgaaagacttgccttttcta
aaaagagacgatcccattgttacctccctggttaagtataaggaatttgatgagcttgtc
cactggcattcccaccgacccctcagtgatgattatgacaggacaaaggccaattttaat
gaacagtcaagagacccttattatcttagaggcattcagaagtatcatgtttttcaacga
ttttatgggaactcattagattcagtctcttcaaagcttatcacaactcaaggcgctaag
ccaaagaaggattgttttaaatccaaaagctcaaagacacatgagaccaaggctgacata
attgctagagagaataagaagaggttacttgccaaggaagaacaaaaagaagaacaaaga
tggaattccttgtcattttatattgaggaggagatgaaaaagaatttaaactctggaatg
aagaagctggaagagttcttgaaatcatgtaaaagtaactcagtaaaatttcaggctgaa
aaagtagggttaaatgtgtgcttaaaagtatggaaggatcactgtcgagcagaaggtgaa
accacgaaagacttaagcaaagctgttggtatgatgaagagaatccactccttgttggac
aaacactctgaacttctgcaagaagcagatcagaaactcatagccagatgtcttatgtat
ttagggtttgatgagctagcaaattcattatatgcaactcaggatgcagcagatgacata
aaaatgagaaagaagaataaatattcagttgggattgggccagcccggttccagctacaa
tacatgggtcactatttgatacgagaagagagaaaagatccagaccctagggttcaagat
tttattcctgacacatggcagagagagctcctggatgtggtggataattatgagtcagca
gtgattgttgccccaacatcttctggcaaaacttatgcttcctactactgcatggagaag
gtgctgaaggagagtgatgaaggtgtggttgtgtatgttgcaccaacaaaggctcttgtt
aaccaagtggcagcaactgttcaacatcgttataccaaaatcatgccagctggcgaagtt
gtatgtggtgtctttacaagggaatatcgtcatgatgccctcaactgtcaggtgcttgtt
actgttccagcgtgctttgaaattctgctactagctcctcatcgtcaaaactgggtgaag
aggatcagatatgttatatttgatgaggtccattgtcttggtggagaaattggagcagaa
atctgggagcatctcctggtcatgatccggtgtccctttttggccctttcagctaccata
agcaaccctcagcacctcactgagtggctccagtcagtaaaaaggtactggaaagaagta
gacagtgctatggaaaaaggaactttttctaaaagaagttgtggctcccgtggcagttat
cacaaagaacgagtgcaagccagacagtcatacaaagttagacttgtgctctatggagag
agatataatgatatggagaagtacttatgttctgtgaggcagggcgatgtttgctttgat
cactttcatccatgtgctgcactaaccgtagatcatattgaaaagtatggatttccttct
gatcttgccttttcaccccgagaaagcatccagctgtatgatactatgcttcaggtctgg
gagagatggccccaggcccagaacctgtgtccagagacgttcactcattttaagaataaa
atagtcattaaaaagctggatgcaagaaaatatgaagagagcctaaaggaagaattcaca
aattggattaaaaatgggaatgaggaagaggccaggatggtgctgaagaaactgagtcct
aatttccaggagcaccgagggcggatgctggacttctttccacgtcttgttgagaagcta
agggaaatggacaagttgcctgcaatattctttctatttagactaggtgatgtagaagaa
tgtgctgaggatgcttgtgaattcctagaaaacaaacaggaggagaaaaggcctcccaaa
gctgataaagaagctcacattgtggctaacaaacttcgaaaagttagaaaatctttggag
aaacaaaagatattaaatgaaaaaagccagaaatcccccagaagattggatcaagcactc
atgtctgaagctgaacacaattacctcctgaagagtctggagaagaatctggagattccc
caggactgcacgtatgctgatcagaaagcaatagatgatgagactttacggatggtgttt
agtcgagtgaaattcgaaagaaaaggtgacagactgaagattttggcaagaagaggcatt
ggctatcaccacagttccatgtctgccaaagaaaagcagttagttgaaattctctttagg
aaaggattcattagggtggtgacagctactggaacactcgcattaggaatcaatatgccc
tgtaaatctgtggtgtttgcacaaaactcagtctatctggatgctttaaatttcagacag
atgtctggtcgggctggacgacgagggcaagacctgctgggtgatgtctacttctttgat
atcccgctgcccaaagtagagaaactcataaaatccaaagttcctgagctgagaggacag
tttcccctcagtatctcattcatcctaagactcatgctgctggcttccaaggcggatgac
ccagaggatggcaaggcaaaggcactgtcagtgctgaagcattcattgctatccttcaaa
cagccccgggtcacagacatgttaaagctttacttcttatattccttacagttcctggtg
aaacagggacatatagatcaggaaggtaatcctacagggtttgctggccttgtatcgcat
ttacactaccacgaaccatctaatctcatatttgtcagtttccttgtaaaaggtcttttc
cataaactttgtcagccgattagtagagacccaaaacgtttttcagaagatgtaatggaa
aaactggttttagtgttggcaaatctatttggaagaagatatttcccagccaagtttgga
gatgctaataccaagttttatcaatcaaaggtattccttgatgaccttcctgaggatttt
agtgatgccctgcttgaatataacatgcaagtgacagaggactttgcttcttttctgcta
attgtgtcccaactggctgatatgaaacaggagtatcaactccccttgtcaaaaattgaa
ttcacaggtaaggagtgtgaagactcaccacttgtgtctcacctgatgaactgtgtggag
ggaagagtggcagtttcaccatttgtctgtctgtctggaaactttgatgtggatttgctt
catccaggagttccagatcatgtcattctgcacacaattggtatcaatcacaaacaagcc
ccagtgctctggccacacagattggacaatcaaggaaggaaaatgccacttaatgcatat
gcacttgacttctataagcatggatctcttctgggattagtccaggacaataggctacat
gaaggggatgcttactacttgttgaaagattttttccttaccattaaatctatcagtgtc
tccttgcgtgaactctgtgaaaatgaagacgacaacgttgttctagcatttgaacaattg
tctgagtcctttcaggcaaagttcgaaaaagtgtga
DBGET
integrated database retrieval system
