Meriones unguiculatus (Mongolian gerbil): 110541300
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Entry
110541300 CDS
T05884
Name
(RefSeq) LOW QUALITY PROTEIN: nonsense-mediated mRNA decay factor SMG7-like
KO
K14409
protein SMG7
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110541300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110541300
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110541300
mRNA cycle factors
Common to processing body (P body) and stress granule
110541300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
TPR_8
TPR_17
TPR_1
TPR_14
TPR_7
zf-AD
TPR_12
Motif
Other DBs
NCBI-GeneID:
110541300
NCBI-ProteinID:
XP_060231426
LinkDB
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Position
X:114373838..114376105
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AA seq
755 aa
AA seq
DB search
MSMKTIQYLQQAEVLKAEMKDSELDPAEVSTTRQALQDLYQKMLVIDLEYALDKKVEQDL
WNHAFKNQITILQGQAKNRANPNWREVQANLSLFLEAASGFYTQLLQELCMVFNVDLPGY
VKSSQLGIISNKQMHTSSIVKPQTSSCAYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LAPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVMFPFPVASTNLQKALSKALETQDDL
KTKWGVSEFINAFIKFHGHVYLSKSLKKLRPFQEKLEEEFKRLVFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWKQLLALFMSFLGILCKCPLQNDSQESYNAYPL
PAVKVSMDWLRLRPRVFQEAVMVEKQYIWPWLVSLLNSFHPHEDDLSTTNSIPLPEEFEL
QGFLALRPSFRKLDFSKGHQAISGHKEVQQRQIRQQRLISIGKWIADNQPQLIQCEYEVG
KLLFITKIPELILEEPSEAKENLILQEICQIESLKIDGNSELKSVLSAGLYPSNSCNRGE
KPVIFNENIKPGEVNRDQERSFTPKEVKSQTELKTTPVSKAGKIPVNQIPIQTNNSQFIL
IHHPEDFPPLPCRPGFPQPTYAIPHPASCSMGSDYTFPAGVSVPGTFLHSKLHSPEGNKV
QGGKQSHAPYSQQRHCGRRPVNQGPQQWQPLSQQPLTPLPAQPTAESTSQMQVQALVQQQ
QPPAKFIPALGKSPPHHSGFXQYQQADASQRSLDK
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaagaccatacagtatctccaacaggcagaagtcctgaaggctgaaatgaaa
gattctgagctggatccagctgaggtctcaacaaccaggcaagctctgcaagatttgtac
cagaaaatgctagttattgatctagaatatgctttagacaagaaagtggaacaggatcta
tggaatcatgcctttaagaatcagatcacaatactacagggccaagcaaagaaccgagca
aacccaaattggcgtgaagtccaggcaaacctttcccttttcctagaagcagctagtggc
ttctatactcagttactacaggaattgtgtatggtgtttaatgtagatttacctggctat
gtgaagtcttcccagttaggaattattagcaataaacagatgcacaccagctccatagtg
aagccacagactagctcctgtgcctatatttgccagcactgccttgtccaccttggagac
attgctcgttacagaaaccagaccagccaggcagagtcctactataggcatgcagcccag
cttgccccctccaatggtcagccttacaatcagttggctatcttagcttcttccaaaggt
gaccacctgaccacaattttctactactgcagaagcattgctgtgatgttccctttccca
gttgcctccactaatctacagaaagcattatctaaagcactggaaacccaggatgatttg
aaaaccaagtggggtgtttctgaattcatcaatgcttttattaaattccacggtcatgta
tatctgagtaagagtttgaaaaagttgagaccttttcaagagaagttagaagaagagttt
aagaggctggtgttccaaaaagctttcaactctcagcagttagttcatatcactgtcatt
aatttgtttcaacttcatcatcttcgtgactttagcaatgaaacagagcagcatagttat
agccaagatgaacagctatgttggaaacagttgctggcccttttcatgtcttttcttggc
atcctgtgcaaatgtcctctccagaacgattctcaggagtcctacaatgcctatcccctt
cctgcagtcaaggtctccatggactggctaagactccgacctagagtctttcaagaagca
gtgatggttgaaaaacagtacatttggccctggctagtttctcttctaaatagtttccat
ccccatgaagatgacctttcaactacaaattccataccacttccagaggagtttgaatta
cagggattcttggctttaagaccttctttcaggaaattggatttttccaaagggcatcag
gcaatttcagggcacaaagaggttcaacagagacaaataagacagcagcgtttgatctct
atagggaaatggattgctgacaatcagccacagctgattcagtgtgaatatgaggtaggg
aaattgttattcatcacaaaaattccagaattaatactagaagagcccagtgaagccaaa
gagaacctcatcttgcaagaaatatgtcagatagagtcactaaaaatagatggcaactca
gaactgaagtcagtgctgtctgcaggcctatatccaagcaacagttgtaacagaggagag
aaaccagtgatcttcaatgagaacattaagccaggagaagtgaacagggaccaagaaaga
agctttactcccaaagaggtaaaatcccagacagaactaaaaacgactccagtttctaag
gcagggaaaatacctgtaaatcaaattccaattcagacaaataattctcagttcattctc
attcatcatcctgaagatttccctcctcttccctgccgaccaggtttcccacaaccaaca
tatgctatcccccatcctgcatcatgttctatgggctcagattacaccttcccagctggt
gtttctgtgccaggaacctttcttcattctaaacttcactctccagaaggaaacaaggtg
caaggtggaaaacagtcccatgctccttacagtcagcaaaggcactgtggacgaaggcca
gtgaaccagggacctcaacaatggcaaccactttcccagcaaccccttacacctctacca
gctcagccaacagcagaatctacaagccaaatgcaggttcaagctctagttcagcaacaa
cagccccctgcaaaattcataccagctttggggaaaagcccgcctcaccactctggattc
tagcagtatcaacaggcagatgcctcccaaagatctctggataaatag
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