Meriones unguiculatus (Mongolian gerbil): 110541790
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Entry
110541790 CDS
T05884
Symbol
Pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K28837
protocadherin-19, delta 2
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
110541790 (Pcdh19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mun04515
]
110541790 (Pcdh19)
Cell adhesion molecules [BR:
mun04515
]
Cadherins
Protocadherins
110541790 (Pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Cadherin_FAT4_N
Ig_Cad99C_N
Motif
Other DBs
NCBI-GeneID:
110541790
NCBI-ProteinID:
XP_060231682
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Position
X:complement(55947293..56109719)
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AA seq
1098 aa
AA seq
DB search
MESLLLPVLLLLAILWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQNPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYSVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEDGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPIINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDSGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQINGEVRTTRTFNENSKASYELIVVAHDHGKTSLSASALILI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCRIAEY
SYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRR
SESTFLNVESQNTGNTTANHIYHHSFNSQGPQQPDLIISGVPLPETENYSFDSNYVNSRA
HLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMP
DHDQNEGFHCREECRILGHSDRCWMPRNPMPTRSKSPEHVRNIIALSIEATAADVEAYDD
CGPTKRTFATFGKDVSSHPAEERPILKGKRTVDVTICSPKVNSAIREAGNGCEAISPVTS
PLHLKSPLPTKPSMSYTVALAPPAHDLEHHANNGASRPSEAEPRGADSEKVMHEVNPILK
EGRDKESPGMKRLKDIVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctcctgctgccggtgctactgctgctggccatactgtggactcaggcagcc
gccctgattaaccttaaatactcggtggaagaggagcagcgggcagggactgtgattgct
aatgtggccaaggacgctcgggaggcggggttcgccctggatccccgacaagcttctgcg
ttccgcgtggtatccaactcagctccgcacttggtggacatcaatcccagctcaggcttg
ttggtcaccaaacagaagatcgaccgagacctgctgtgccgccagaaccccaagtgtatc
atctctctagaggtcatgtccagctcaatggagatctgtgtgattaaggtggagatcaag
gacctgaacgacaatgcccccagttttccggcagcacagattgagctggagatctctgag
gcagccagccctggcactcgaatcccactcgacagtgcttatgatccggactcaggcagt
tttggtgtgcagacctatgagctcacgcccaatgagctgtttggcctggagataaagacg
aggggtgacggttcccgctttgctgagctagtggtggagaagagcctggaccgcgagaca
cagtcacactacagctttcgaatcacagcgctcgatggaggcgacccaccacacttgggc
acagttggcctcagcatcaaggtgactgactccaatgacaacaacccggtgtttggtgag
tccacctactcagtgagcgtgcctgagaactcacctcccaatacacctgtcatccgcctc
aatgccagtgatccagatgagggcaccaacggccaggtggtctactccttctatggctat
gtcaatgaccgcacacgtgaactcttccaaattgacccacacagcggcctggtcactgtc
accggtgcactcgactatgaagatggccatgtgtatgaactggatgtgcaagccaaggac
ctggggcccaactctatccctgcacactgcaaagtcaccgtcagcgtgctggacactaat
gacaacccaccaattatcaacttactgtcggtcaatagtgagcttgtggaagtgagcgag
agcgctcccccaggatacgtgattgccctggttcgggtgtctgatcgtgactcgggcctc
aatggacgtgtgcagtgccgcttgctgggcaatgttccctttaggctgcaggagtatgag
agtttctccactatccttgttgatggacggctggatcgcgagcagcatgaccagtacaat
cttacgattcaggctagagacagcggtgtacctatgctgcaaagtgcaaagtcttttact
gtgcgcatcactgatgagaatgacaaccacccacacttctccaagccttactatcaagtc
attgtacaggagaacaacacccctggcgcctatctgctctctgtgtcagcccgtgaccct
gatttgggtctcaacggcagtgtctcctaccaaattgtgccatcacaggtgcgagatatg
cccgtcttcacctatgtctccatcaatcccaactctggtgatatctatgcgctaagatcc
tttaatcacgagcagaccaaagcatttgaattcaaggtgctggccaaagatggcggcttg
ccctccctgcaaagcaatgccacagtgagggtcattatcctagatgtcaatgacaatacc
ccagtcatcactgccccacctctgatcaatggcactgctgaggtctacattcctcgaaat
tccggcataggctacttggtgactgtagttaaggcagatgattatgatgagggtgaaaat
ggccgagtcacctatgacatgacagagggtgacagaggtttcttcgaaatagaccagatc
aatggagaagtcagaaccactcgcacctttaatgagaactccaaggcttcctatgagctt
atagtggtggcccatgaccatggcaagacatctctttctgcctctgcccttatcctaata
tacttgtcccctgctcttgatgcccaagagtcaatgggctccgtgaacttatccctgatt
ttcattattgctctgggctccattgctggcattctctttgtcactatgatcttcgtggca
atcaagtgcaagcgtgacaacaaagagatccggacctacaactgcagaatcgctgagtac
tcctatgggcatcaaaagaaatcaagtaagaagaaaaaaattagtaagaacgacatccgc
cttgtacctcgggatgtggaggagacagacaagatgaatgttgtcagttgttcctccctt
acttcatccctcaactacttcgactaccaccagcagacactgcccctgggctgccgccgc
tctgagagcactttcctgaatgtggagagccagaatactggaaacaccactgccaaccac
atctaccatcactccttcaacagccagggtccccagcagccagatctgatcatcagtggt
gtacccctgcccgagactgaaaactattcttttgactctaactacgtgaacagccgtgcc
catttaatcaaaagcagttccaccttcaaggacctagagggcaacagcctgaaggatagt
gggcatgaggagagtgaccagactgacagtgagcatgatgtccagaggagcctgtactgt
gatactgctgtgaatgatgtgctgaacaccagcgtgacctccatgggatctcagatgcct
gaccatgaccagaatgaaggatttcactgcagggaagaatgcaggattcttggccactct
gatagatgctggatgccccggaatcccatgcctacccgctccaagtctcccgagcatgtg
aggaacatcattgctctgtccattgaagctaccgctgctgatgttgaggcttatgacgac
tgtggccccaccaagcggacttttgcaacctttggaaaagatgtcagtagccacccggct
gaggagcggcccatcctgaaaggcaagaggactgtcgatgtgaccatctgcagccccaaa
gtcaacagcgctatccgggaagcaggcaacggctgtgaagctattagccctgtcacctcc
ccactccatctcaagagtcctctgcccaccaagccttccatgtcttacaccgtcgccctg
gctcctccagctcatgatttggagcaccatgccaacaacggcgcttctcgtccttctgaa
gctgagccccgtggagctgacagcgagaaagtcatgcacgaggtcaacccaattctaaaa
gaaggtcgtgacaaggaatctcctggcatgaagcgtctgaaagatattgttctgtaa
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