Meriones unguiculatus (Mongolian gerbil): 110542165
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Entry
110542165 CDS
T05884
Symbol
Shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mun04121
]
110542165 (Shprh)
Enzymes [BR:
mun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110542165 (Shprh)
Ubiquitin system [BR:
mun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110542165 (Shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
PHD
TPR_12
PEP-utilisers_N
TPR_10
LMBR1
TPR_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
110542165
NCBI-ProteinID:
XP_060236261
LinkDB
All DBs
Position
3:complement(85851359..85945928)
Genome browser
AA seq
1678 aa
AA seq
DB search
MSSRRKRVPPVKVNEERQQQLHWDMYENLRNEPLTFTVEEQPCSGADSSSDCIIIDDDPP
EGAVHRDKKRRSEAVSTLESTKKETTLSVTMNVKISPYHADHSWKAFLGDFALQLLPEES
LVEHFSERSFTLISSESSNEFLIYAHSECKDVEKQEDVLKESAHVCGKGVRVESSFTSDM
LQDLAWLQMKKGIKLYQRPEGNHTIKVGIYILEAGLTRLDFMSDASSRMKKFNQLMKRVM
EKLHNFIIPDILEDDNEDSESETEGQDIDELYHFVKQKHLQETQSVQVDVQHPALIPVLR
PYQREAVNWMLQQEHFRSVPAADNSLHFLWREIVTPDGLKLYYNPYTGCIIRDFPHAGPQ
LLGGILADEMGLGKTVEVLALILTHTRQDVRQDGLTLPEGKVVNYFIPSHCPKGKVKNRE
IQDTEYEPKEKIHCPPTRVMILTAVKEMNGKKGVSLLSIYKYVSSIFRYDVQRNRSLLKR
MLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDIFDKTKKQAMGIPRKIQKELRKSVSKD
TDSEYLPSSNTSDDDDDPYYYYCKARKNRSNLKKKPVLVTKKEKSQACSLDSQVHIPTAG
DSASTDSHVLENTSVYEDKQNQKAKDHAESPNPAPEDFPHSNSAGPCETSDYRFECICGE
FDQNGCKPRVQCLRCHLWQHAKCVNYEEKNLKVKPFYCPHCLVAMDPVSTRATLIISPSS
ICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELNYVDIP
HSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWC
ISGTPVQRGLEDLFGLVVFLGIEPFCVKHWWIRLLYHPYCKKNPQHLFSFIAKILWRSAK
KDVIDQIQIPPQTEEMHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALKLSSLDRR
TVSSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCATECEEAHRQLVC
ALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLVAKHPG
IPPTLRDGRLEEEAKQLREHYMTRCNTEVAEAQQALQPVQQSIRELQKKIHSNSPWWLNV
IHKAMEFSVDEDLVQRVRNEIISNYKQQTDKLSMSEKFHDCRGLQFLLTTQMEELLKFQK
LVREAVKKLERPPSRDVIESATVCHLRPVRLPLNCCVFCKADELFTEYESKLYSNTVKGQ
TAIFEEMIEDEEGLVDDRVPTTTRGLRAISETERSMKAVLSFARSHRFDVEYIDEGSVSM
DLFEAWKKEYKLLHEYWMTLRDRVSAVDELAMATERLRVRHPKEPKPNPPVHHIIEPHEV
EQNRIKLVNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGINPEPCPICARQLGKQWAV
LTCGHCFCNECTSIIIEQYSVGSHRSSIKCAICRQTTSHKEVSYVFTSEKANQDDDIPVK
GSHSTKVEAVVRTLMKIQLGDPGAKALVFSTWQDVLDIISKALTDNNMEFTQISRIKTFQ
ENLSAFKHDPQINILLLPLHTGCNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTK
PTIVHRFLIKATIEERMQAMLKTAERSHTSSSGKHSEASVLTVADLADLFTKDTEELE
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgaaggaagcgtgttcccccagtgaaggtgaatgaagaaaggcaacagcag
cttcactgggacatgtatgaaaacttgaggaatgagccactcacctttactgttgaggag
cagccctgctcaggtgcagactcctcttccgattgcatcatcatagatgatgaccctcct
gaaggtgcagttcacagagataagaagaggcggtcagaggctgtgagcaccttagaatcc
accaaaaaagagaccactttgtctgtgacgatgaatgttaagatttctccctatcatgca
gaccattcttggaaagcgtttctgggagattttgctcttcagcttctccctgaagagagt
ttagttgaacatttctctgaaaggagttttacactgataagttcagagtcaagcaatgag
ttcctgatctatgctcattcagaatgtaaagatgtagagaaacaagaagatgtactcaaa
gagtcagcccatgtttgtggtaagggtgttcgagtggaatcctccttcactagtgacatg
ttacaggatttggcctggctgcagatgaaaaaaggaataaaactctatcagagaccagaa
ggaaatcatacgatcaaggttggaatttatatcttggaagctggcctaacaagactagat
tttatgagtgatgcaagttcaagaatgaaaaagttcaatcagcttatgaagagagtgatg
gaaaagttacataattttattattccagatatccttgaagatgataatgaggattcagag
agtgagacagagggtcaagacattgatgagctctatcactttgtgaagcaaaaacacctg
caagaaacacagtcagtgcaagtggatgtccagcaccctgcattgattccggtgctgaga
ccttaccagagagaggcagtcaactggatgcttcagcaagagcatttcagaagcgttcct
gctgctgataactccctgcacttcttatggcgagaaattgttacacctgatggtttgaaa
ctctactataatccatacactggctgcatcattcgtgatttcccgcatgctgggccacag
ttgcttggtggaatcttagcagatgagatgggtctcggaaagaccgtggaagttctggct
ctgattctgacacatactcgacaagatgtcagacaggatggtctcacccttcctgagggg
aaagtggtgaattatttcatcccatctcattgtcctaaaggaaaggtgaaaaatagagaa
atccaggatacagaatatgaaccgaaagagaaaattcactgcccccctacacgtgtgatg
attctaacagctgtgaaagaaatgaatgggaaaaaaggagtttctcttctttccatctat
aaatatgtcagctctatattcagatacgatgttcagcggaaccggagtcttctgaagcga
atgctgaagtgtttaatctttgaaggtcttgtgaagcagatcaaaggccatggtttctct
ggtacttttacactgggcaagaattacaaagaagaagatatatttgataaaacaaaaaag
caggcaatggggattccaaggaagatccagaaagagttaaggaagtcagtgagcaaggac
acagattctgaatacctgccatcatccaacacttctgatgatgatgatgatccttattat
tattactgtaaggccagaaaaaatcgtagtaatttgaagaaaaaacctgttttagtcact
aaaaaggagaagagtcaggcttgcagtttggattctcaagttcacattccaactgctgga
gactctgcaagcactgattctcatgtgttggaaaatactagtgtctatgaagataagcaa
aaccagaaagcaaaagaccatgctgagtctccaaaccctgctcctgaggacttcccacat
tctaacagtgcgggtccctgtgagacctctgattaccgttttgagtgcatatgtggtgaa
tttgatcagaatggctgcaaaccaagagttcagtgtctgaggtgtcacctgtggcagcat
gcgaaatgtgtgaattatgaggagaagaatctgaaggttaagcctttttactgcccccac
tgccttgttgcaatggatccagtgtcaacaagagcaactctgattatctctccaagctcc
atttgccaccagtgggtggatgaaatcaaccggcatgtgagatcatcatctcttcgagtt
ttggtataccaaggagtgaagaaagatggcttcttacagcctcattttttggcagaacaa
gatatagttatcattacctatgatgttcttcgttcagaactaaactatgtcgatatccca
catagcaatagtgaggatggccgtcgcctgaggaaccagaagcgctatatggccattccc
agccctctggtagcagtggagtggtggaggatctgtcttgatgaggctcagatggttgaa
tgccctacagtaaaagctgcagaaatggcccagcgtttgagtggaattaatcggtggtgc
atcagtggcactccagtgcagagaggattggaggatctttttggactggtggtctttctt
gggattgaacctttctgtgtcaaacactggtggattcgacttctctatcatccatattgc
aagaagaatcctcagcacttattcagttttattgccaagatactgtggagatctgcaaag
aaagatgtcattgaccaaatccagattccacctcagactgaagaaatgcactggctccat
ttttcccctgtggagagacatttctatcaccgccagcatgaggtgtgctgccaggatgct
gtggtaaagctcaggaagatctctgactgggccctgaagctaagcagcttggacagaagg
actgtctcctccatcctgtacccactgctgaggctcaggcaggcatgctgccacccacag
gctgttcgtggggagttcttgccactccagaagagcaccatgacaatggaagagctgctg
acatctttgcagaagaaatgtgcaacagaatgtgaagaggcccaccggcaactagtttgt
gccctcaacggcttagcaggcattcatatcattaaaggtgagtatgccttggcggcagag
ctatacagagaagtactacgctcatctgaggaacacaaaggaaaactcaaaactgactca
ctacaaagacttcatgccacacataacttaatggagctgttggtagccaaacatccaggg
atacctcctaccttgagagatggcagacttgaagaagaggccaagcagcttcgggaacat
tatatgactaggtgcaatacagaagttgctgaagcccagcaagctttgcagcctgtgcag
cagtctatacgggagctccaaaaaaagattcactctaattctccctggtggctgaatgta
atccataaagcaatggaattttctgttgatgaggaccttgttcagcgggtgcgaaatgaa
ataatcagtaactacaagcaacaaactgacaagctctctatgtcagagaagttccatgac
tgcagaggtcttcaattcttactcacaacgcaaatggaagagctccttaaattccagaag
ctagtgagggaggctgtgaagaagctagagagacctccatcccgtgatgtgattgaatct
gcaacagtctgccacttgcggccagttagactccctctcaactgctgcgtcttttgtaaa
gctgatgaactgtttacagagtatgaatcaaagctatattctaacacagtcaaaggccag
actgcaatctttgaagaaatgatagaagatgaagaaggacttgtggatgatagagtacct
accactaccagaggcctgagggcaataagtgagacagagagatctatgaaagcagtattg
tcatttgcaagatcacataggttcgatgttgaatatatagatgaaggaagtgtttcaatg
gatctctttgaggcatggaagaaggaatataagttacttcatgaatactggatgactctg
agagatcgcgtgtctgctgttgatgaacttgcaatggctacagagcgactaagagtacgc
catcctaaggagccaaagccaaacccacctgtccatcacatcattgaacctcatgaggta
gaacagaatcgtataaaactggtgaatgataaagccgttgctacatcacagcttcagaaa
aaacttggacagcttctttacctaacaaatttggagaagtctcaagataaaacatcagga
ggtattaatccagaaccttgtccgatctgtgctcgacagctgggaaagcagtgggcagta
ctgacctgcggacactgcttctgtaatgaatgcacttctattataattgaacagtacagt
gtggggtctcatcgaagctccatcaagtgtgctatctgccgtcagactacatcacacaaa
gaagtctcctatgtctttacctcagagaaagcaaaccaagatgatgacatccctgtaaag
ggtagccattctacaaaagttgaagctgtggtcagaactctgatgaaaatacagcttgga
gatccaggggccaaagcactcgttttttcaacgtggcaagatgtgttagatattatttca
aaagccctcacagacaacaacatggaatttacacagattagtcgcattaagacattccag
gagaacctttcagcatttaaacatgatcctcaaatcaatattttgctgctgccacttcac
acgggctgtaatgggttaactatcattgaagccactcatgtccttctggtggagcctatc
ctgaaccctgcccatgagcttcaggccattggaagggtgcaccgaattggacagacaaag
cctactattgtacatagattcttaattaaagcaacaatagaagagcgaatgcaggcaatg
ctgaaaactgctgagaggagccacacaagctcatctgggaagcattctgaagcctctgtg
ttgactgtggccgacctggcagacctgtttaccaaagacacagaagagcttgaatga
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integrated database retrieval system
