Meriones unguiculatus (Mongolian gerbil): 110543357
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Entry
110543357 CDS
T05884
Symbol
Ythdc2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mun03041
]
110543357 (Ythdc2)
Enzymes [BR:
mun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110543357 (Ythdc2)
Spliceosome [BR:
mun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110543357 (Ythdc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
Ank_2
HA2_N
AAA_19
nSTAND3
Ank
AAA_22
ATPase
PhoH
AAA_16
AAA_7
UvrD-helicase
Ank_4
AAA_29
ABC_tran
T2SSE
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
110543357
NCBI-ProteinID:
XP_060233293
LinkDB
All DBs
Position
2:complement(43427720..43491873)
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AA seq
1433 aa
AA seq
DB search
MSRPSSVSPRPPAPGGGGTGGGGGPASCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFR
YGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTC
NLTHNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQV
PVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN
GIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLL
RTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFI
RYFGSCPVIYIQGRPFEVKEMFLEDILKTTGYTNKEMLKYKKEKQREEKQQTTLIEWYSA
QENTFKPESQRQRAVASVSEDYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIW
LHKDVDAFAQVFHLILTENVSVDYRHSDTSATALMVAAGRGFTSQVEQLISMGANVHNKA
SNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGNDLSAEERELLKAYHH
SFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQ
VFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDAL
NFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELC
LHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPV
EPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDH
MALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGD
IRDVNTNSENWAVVKAALVAGMYPNLVHVDRENIVLTGPKEKKVRFHPTSVLSQPQYKKI
PPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEP
SSFRADGIPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRR
MRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNN
SRKSSADTEFADGSTTAERVLMKSPSPALHPPQKYKDRGILHPKRSTDDRSDQSSVKSTD
SSSYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNE
RKLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKE
SLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKTTAD
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctcgccgcggccgccggctcctggcggaggcggcaccgga
ggcggcggcggccccgcttcgtgtggtcctggaggcggtggccgggccaaggggctcaaa
gacattcgtatcgacgaggaggtgaagatcgctgtcaacatcgctctggagcgcttccga
tatggtgaccagcgagaaatggaatttccttcttctttgaccagtacggaaagagccttt
attcaccggctgagtcagtctcttggtttagtttctaaaagtaaaggaaagggagcaaat
agatacctaactgtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgt
aatttgactcataatacaaaacatgctgttaggagcctaattcagagatttcctgtcacc
aataaagaacgtactgaacttctgcctaaaacagaaagaggaaatgtgtttgcagttgaa
gctgaaaaccgagaaatgagcaagaccagtgggcgactcaacaatggtatacctcaagtt
cctgtgaaaaggggagaatctgaatttgactcattcaggcagtctttaccagtttttgag
aaacaagaagaaattgttaaaataattaaggaaaataaagtagttttgattgtaggagaa
actggatctggaaagaccacacagattcctcagttcctgttagatgattgctttaaaaat
ggcatcccctgccgaatattttgtactcagccaagacgattagcagctattgctgtggct
gaaagagtggctgcagagcgaagggaaaggattggtcaaacgattggttaccagattcga
ttagaaagcagggtttctccaaagacacttctgacgttttgcactaatggggtattgctt
cgtacgttgatggcaggcgatagcacattgtcaactgtgacccatgttattgtggatgaa
gtacacgaaagggatcgattcagtgattttttacttacaaagttaagagatttgttgcag
aagcacccaactttgaaactaattctttctagtgcggccttggatgtaaatctcttcata
agatattttggaagttgtccagtgatatatatacaaggaagaccatttgaagtaaaagaa
atgtttctggaagatattttaaaaaccactggatataccaacaaagaaatgttaaagtac
aaaaaggaaaagcaaagagaggagaaacaacagaccacactcatagaatggtactcagct
caagagaatactttcaagcctgaatctcagaggcagagagctgttgcaagtgtgtctgag
gattatgatttattggatgatggcggtgatgctgtcttcagtcagctgacagaaaaagat
gtgaattgccttgaaccatggttaattaaggaaatggacgcttgcctttctgacatatgg
cttcataaggatgttgatgcttttgctcaggtctttcatcttattttaactgaaaatgtt
agtgttgattacaggcatagtgacaccagtgcaacagctctgatggttgctgcaggacgg
ggttttacaagccaagtagagcagttaattagtatgggagccaatgtccacaataaagca
tccaatggctggatggctttagattgggctaagcactttggacagactgaaattgtggat
cttctagaatcttacagcgcttcattggaatttggaaatctagatgaaagttctttggtt
caaacgaatggaaatgacctcagtgctgaagaaagagagctgctgaaagcttatcatcat
agttttgatgatgagaaagtagacttggatttgatcatgcatcttctatacaatatctgc
cacagttgtgatgccggtgcaatattaatttttctacccggatatgatgaaattgttggt
ttgagggatcggatccttttcgatgacaagcgatttgctgacaatacacatagatatcaa
gtctttatgcttcattcaaatatgcagacatctgatcaaaagaaggtattaaaaaatcca
cctgcaggtgtccgaaaaattatcctttccaccaatattgctgaaacaagcatcactgtc
aatgatgttgtctttgttatcgattctgggaaggtgaaggagaaatcctttgatgcactg
aattttgtcacaatgttaaaaatggtatggatttccaaagctagtgccatacagcgcaaa
ggcagagcgggacgatgtagacctggaatttgtttccgtctgtttagtagactccgattt
cagaacatgctggaatttcagactccagagctcttgaggatgccgttgcaggaactttgt
ctacataccaagctgttagccccagttaattgtaccattgctgacttccttatgaaagct
cctgaaccacctccagctttaattgtaagaaacgctgttcagatgcttaagacaatagat
gcaatggatgcatgggaagacctgactgaacttgggtatcatttggctgatttgccagta
gagccacatcttggtaaaatggtcctgtgtgctgttgttttaaagtgcctggatcccatt
ctcacaatcgcttgcacactagcttatcgcgacccttttgtactgccaacccaggcctct
cagaaacgtgcagccatgctttgtaggaagcgcttcactgcagggactttcagtgaccac
atggcccttctcagagcattccaggcatggcagaaagcgcgaagtgatgggtgggagaga
gccttttgtgaaaagaattttctttcacaggctaccatggaaatcattataggcatgaga
acacagttgcttggtcagcttcgcgcatcaggttttgttagagcacgaggtggtggtgac
attcgagatgttaacacaaactccgaaaactgggctgttgttaaagctgcattggtagca
ggcatgtatcctaatttagtccatgtggacagagagaatatagtattgacagggccaaag
gaaaaaaaagtacgatttcatcctacttcagttctcagtcagcctcaatataaaaagatc
cctccagccaatggtcaggctgcagcaattcaggcattgcccacggattggcttatttat
gatgaaatgaccagagctcatagaattgcgaatatcagatgctgttcagcagtgacacct
gtaactgtcctggtgttctgtggaccagcaagactggcaagtaatgctcttcaggaacct
tcttcctttagagcggatggcatccccaatgatagtagtgacagtgaaatggaggacaga
actactgctaatttggctgctttgaaacttgatgagtggcttaatttcaaactagagcca
gaggctgccagtttattgctgcagctcagacagaagtggcatagcttgtttttacgccga
atgagagctccatctaaaccctggtctcaagtcgatgaagctaccatacgagcaattata
gctgttttaagcactgaagaacaatctgcaggtttacagcaaccatctggaattggccag
aggccaagacccatgtcttcagaagaacttcctttggcttcatcttggagatccaataat
agtaggaaaagttcagctgacactgagtttgctgatggatctaccacggcagaaagagta
ctgatgaaatctccatctccagccttacatccacctcagaaatacaaagatagaggaatt
ttacatcctaaacggagcactgatgaccgatcggatcaatcatctgtgaaatccacagac
agcagcagttacccaagtccttgtgctagtccgtctcctccatcctcagggaagggctcg
aagtctccttcaccaagaccaaacatgcctattcgttacttcataatgaagagtagcaat
ttgagaaaccttgaaatttctcaacagaagggtatctggtccacaactcctagtaatgag
cggaagctaaatcgagcattttgggaaagcagcatggtttacttggtattttctgttcaa
ggatctggacatttccagggattttctaggatgtcttctgagataggaagggagaagagc
caggactgggggtcagctggactagggggagtgtttaaagtggagtggatacgcaaagaa
agcctgcccttccagtttgcacaccatttactcaatccttggaatgacaacaaaaaagta
cagataagcagagatgggcaggaactagaacctcaggttggtgaacagttgctccaattg
tgggaacgtcttccattgggagaaaagactacagctgattga
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