Meriones unguiculatus (Mongolian gerbil): 110546628
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Entry
110546628 CDS
T05884
Symbol
Prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110546628 (Prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mun03041
]
110546628 (Prpf8)
Spliceosome [BR:
mun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110546628 (Prpf8)
Complex C
U5 SnRNP specific factors
110546628 (Prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
110546628
NCBI-ProteinID:
XP_021489281
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All DBs
Position
7:complement(44677470..44701670)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
SQLPQHEYLKETEPLGWVHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggggtgtttccttaccgagggccgggtaacccggtgcccggccctctggccccg
ctgccggactacatgtcagaggagaagctgcaggagaaagctcgaaaatggcagcagttg
caagccaagcgctatgcagagaagcggaaatttgggtttgtggatgctcagaaggaggac
atgcccccagaacatgtcaggaagatcatccgagaccatggtgacatgaccaacaggaag
ttccgtcacgacaaaagggtctatttgggagccctcaagtatatgcctcatgcggttctc
aagctcttagagaacatgcccatgccttgggagcagattcgggatgtgcctgttctgtac
cacatcactggagccatttcctttgtcaacgagattccctgggttatcgagccggtttac
atttcccagtgggggtcaatgtggatcatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccgcccctggattatgccgac
aacatcttggatgttgagccgctggaagccattcagctagagctggaccctgaggaggat
gctcctgtgctggactggttctatgaccaccagccactgagggacagtaggaagtatgtt
aatggttccacctaccaacgctggcagtttaccttgccaatgatgtccactctctaccga
ttggccaatcagcttctgaccgacttggtggatgacaactacttctatctgtttgatctg
aaggctttctttacctctaaggcactcaacatggccattcctgggggacctaaatttgaa
cctcttgttcgcgatatcaacctgcaggatgaagactggaatgaattcaatgatattaat
aagatcatcatccgtcagcctattcgaactgagtacaagattgcttttccttacctgtac
aacaaccttccgcaccacgtccacctgacctggtaccacactcctaacgttgtgttcatc
aagactgaggatcctgatttgccagctttctactttgatcctctgatcaaccccatctcc
cacagacactcagtcaagagccaggaaccactgcctgatgatgatgaggagtttgaactc
ccggagtttgtggagcccttcctgaaggacacgcccctctatacagacaatacggccaat
ggcattgccctgctctgggcaccacggcccttcaacctacgctctggtcgtacccgccgg
gccctggatataccccttgtcaagaactggtatcgggagcactgtcctgctgggcagcct
gtgaaagttcgagtctcctatcagaagctgcttaagtactatgtgctgaatgccctgaag
catcggcctcccaaagcccagaagaagcgctacctattccgctcattcaaagctaccaag
ttctttcagtccacaaagctggactgggtggaggtggggctgcaggtctgccgccagggc
tacaacatgctcaacctcctcatccaccggaagaacctcaactacctgcacttggattat
aacttcaacctgaagcctgtcaagacgctcaccaccaaggaaagaaaaaaatctcgtttt
ggcaatgctttccatctgtgtcgggaagtgcttcgtttgactaagctggttgtggatagt
catgttcaatatcgcttgggcaatgtggatgccttccagttggcagatgggttgcagtat
atattcgctcacgtggggcagttgaccggcatgtatcgatacaaatacaagctgatgcgg
cagatccgcatgtgcaaggacttgaaacatctcatctattaccgcttcaacacgggccct
gtagggaaaggccctggctgtggtttctgggcggctggctggcgggtctggctgtttttc
atgcgtggaattactcctttgctagagcgatggctgggcaacctcctggcccgacagttt
gaaggccgtcactcaaagggagtggcaaagacagtaacaaagcaacgagtggagtctcac
tttgacctcgagcttagggcagctgtgatgcacgacattttggacatgatgcctgaaggc
atcaaacagaacaaggcccgaacaattctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccttggaaggtcccaggactgccaacacctatagagaacatgattctt
cggtacgttaaggccaaggctgactggtggaccaatactgcccactacaaccgtgaacgg
atccgccgtggggccactgtggacaagactgtttgcaaaaagaacttgggccgcctcacc
cgcctgtacctgaaggcagaacaggagaggcagcacaattacctgaaggatgggccttac
atcacagcagaggaagcagtggcagtgtataccaccactgtgcattggctggagagccgt
agattctcacccatcccattccccccactctcctacaaacatgacaccaagttactcatc
ttggctctagagcgcctcaaggaagcttatagtgtgaagtcgaggttaaaccagtctcag
agggaggagttgggtctgatcgagcaagcctatgacaacccccatgaggctttgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaggaagtgggcattgagttcatggat
ctctatagccacctggtgccagtgtatgatgtggaaccactggagaaaataactgatgcc
tacctggaccaatacctgtggtatgaagcagataagcgccgtcttttcccaccctggatc
aagcctgctgacacagaaccgcctccactgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggatgtgtgggagaccagtgagggcgagtgcaatgtcatgttggagtcccgc
tttgagaagatgtatgaaaagattgatttgaccctgctcaataggctgctgcgactcatt
gtggaccacaacatagctgactacatgacagccaagaacaatgtcgtcattaactataag
gacatgaaccatacaaattcatatgggatcatcagaggcctgcagtttgcctcattcatt
gtacagtactatggcttggtgatggatttgcttgtattgggattacaccgggccagtgag
atggctgggcctcctcagatgccaaatgacttcctcagtttccaggacatagccaccgag
gctgcacacccaatccgactcttctgtagatacattgatcgcatccatattttcttcagg
ttcacagcagatgaggctcgggatctgatccagcgttatctgacagagcatccagacccc
aacaatgaaaatattgttggctacaataacaagaaatgctggccccgagatgcccgcatg
cgcctcatgaagcatgatgtcaacctgggtcgggcagtgttctgggacatcaaaaaccgg
ctgccgcgctcagtgactacagtccagtgggagaatagctttgtgtctgtgtacagtaaa
gacaaccccaacctgctcttcaacatgtgtggctttgagtgccgcatcttgcctaagtgc
cgtaccagctatgaggagttcacccacaaggacggggtctggaacctacagaatgaggtt
accaaggagcggacagctcagtgtttcctgcgtgtggatgatgagtcaatgcaacgtttc
cataaccgagtgcggcagattctgatggcctctggctccaccacttttaccaagattgtg
aataagtggaatacagctctcattggccttatgacatattttcgagaggctgtggtgaat
acacaggaactcctagacttactggtaaagtgtgagaacaagatccagacccggatcaag
attggactgaactccaagatgccaagtcggttccccccagttgtgttctacacccctaaa
gagctgggagggcttggcatgctctcaatgggccatgtgcttatcccccagtctgacctc
aggtggtctaagcaaacagatgtgggtatcacacacttccggtcaggaatgagtcatgaa
gaagaccaactgattcccaacttgtaccgctacatacagccatgggagagcgagttcatt
gactctcaacgggtctgggctgagtatgcactcaagagacaggaggcaattgcgcagaac
agacggttgactttagaagatttagaagattcatgggatcgaggcataccccggatcaat
accctcttccagaaggaccggcacacgttggcttatgataagggctggcgtgtccgaact
gactttaagcagtaccaggttttgaagcagaaccccttttggtggacacaccagcggcac
gatggcaagctctggaacctcaacaactaccgcacagacatgattcaggccctgggcggc
gtggagggcattctggagcacaccctcttcaagggcacatacttccctacctgggaaggt
ctgttctgggagaaagccagtggctttgaggaatccatgaagtggaagaagctgaccaat
gctcagcgatcaggattaaaccagattcctaatcgtagattcaccctttggtggtcccca
acaatcaacagagccaatgtatatgtaggcttccaggtgcagctggacttgacaggaatc
ttcatgcatggcaagattcctacactgaagatctccctcatccagatattccgggctcac
ctgtggcagaagatccacgagagcatcgtgatggacttatgccaggtctttgatcaggaa
ctggatgcactagaaattgagacagtacaaaaggagacaatccatccccgaaaatcctat
aagatgaactcttcttgtgcagatatactactctttgcttcctataagtggaatgtctcc
cggccatcactgctggcagactccaaggatgtgatggacagcaccaccacacagaagtac
tggattgacatccagttacgctggggagactatgattcccatgatattgagcgatacgca
cgggccaagttcctggactacaccactgacaacatgagtatctacccttcgcccactggc
gtgctcattgctattgacctggcctacaatctacacagtgcctatggaaactggttccca
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaatcctgcactg
tatgtgttacgtgaacggatccgcaaaggattgcagttgtattcatctgagcccactgag
ccttatctgtcctctcagaattatggtgaactcttctctaaccagatcatctggtttgtg
gatgacaccaacgtctacagagtgactatccacaagacctttgaggggaacttgacaacc
aaacccatcaatggggccatcttcatcttcaatccacgcacggggcagctgttcctcaag
ataattcacacatccgtgtgggctggacagaagcgtttgggtcagttggccaagtggaag
acagctgaggaagtggctgccttgatccgctctctgcctgtggaggaacaacctaaacag
attattgtcaccaggaagggcatgctggatccgctggaggtacacttactggacttcccc
aatattgtgatcaaaggatcggagctccagctacccttccaggcttgtctcaaggtggag
aagtttggggatctcatccttaaagccacagagccccagatggttctcttcaacctctat
gatgactggctcaagactatctcatcctacacggccttttcccgtctcatcctgattctg
cgcgctttgcacgtgaacaacgatagggcaaaggtgatcctgaagccagataaaactact
attacggagccccatcacatctggcccacgctgactgacgaggagtggatcaaggtggag
gtgcagctgaaggacctgatcttggctgactatggcaagaaaaacaatgtgaacgtggca
tcactgacacaatcggaaatccgggacatcatcctcggaatggagatctcggccccatca
cagcagcggcagcagatagccgagattgagaagcagaccaaggaacagtcccagctcacc
gccacacagacaagaacagttaacaagcatggcgatgagatcatcacctccaccaccagc
aactatgagacccagaccttctcatcgaagactgaatggagagtcagggccatctccgct
gccaacctgcatctacggaccaatcacatttatgtttcatctgatgacattaaggaaact
ggttacacttacattcttcccaagaatgtgctcaagaagttcatctgcatttctgatctc
cgtgcccaaattgcagggtacctgtatggggtgagccctccagataaccctcaggtgaag
gagatccgctgtattgtgatggtgccacagtggggcactcaccagactgtgcacctgccg
agccagctgccccagcacgagtacctcaaggagacggagcccttaggctgggtccacact
cagcccaacgagtctccccagctgtcgccccaagacgtcacaactcatgccaagattatg
gctgacaacccatcctgggacggtgagaagacaatcatcatcacctgcagcttcacacca
ggctcctgcaccctgacggcctacaagctaacccctagtggctatgagtggggccgacag
aacacagataaaggcaacaaccccaaaggctacctaccctcacactatgagagggtccag
atgctcctgtccgaccgattcctcggcttctttatggtccctgcccagtcctcctggaac
tacaactttatgggtgttcggcatgatcccaacatgaaatacgagctgcagctggcaaac
cccaaggaattctaccatgaggtccacaggccttcccatttcctcaactttgccctcctg
caggagggtgaggtctactccgcagacagggaggacctctatgcctag
DBGET
integrated database retrieval system
