Meriones unguiculatus (Mongolian gerbil): 110546969
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Entry
110546969 CDS
T05884
Symbol
Ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mun03009
]
110546969 (Ighmbp2)
03012 Translation factors [BR:
mun03012
]
110546969 (Ighmbp2)
Enzymes [BR:
mun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110546969 (Ighmbp2)
5.6.2.5 RNA 5'-3' helicase
110546969 (Ighmbp2)
Ribosome biogenesis [BR:
mun03009
]
Eukaryotic type
Other ribosome biogenesis factors
110546969 (Ighmbp2)
Translation factors [BR:
mun03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110546969 (Ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
zf-AN1
DEAD
ResIII
nSTAND3
UvrD-helicase
AAA_16
SLFN-g3_helicase
Helicase_RecD
AAA_22
IstB_IS21
AAA_25
PhoH
DnaB_C
AAA
ABC_tran
VWA_2
Flavi_DEAD
UvrD_C_2
NPHP3_N
NTPase_1
ATPase
Motif
Other DBs
NCBI-GeneID:
110546969
NCBI-ProteinID:
XP_021489857
LinkDB
All DBs
Position
1:complement(22212397..22234834)
Genome browser
AA seq
992 aa
AA seq
DB search
MEEMASSTVESFVAQQLELLELERNAEVEERRSWQEHSSLKELQSRGVCLLKLQVSSQRT
GLYGQRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNESSQLATGVLTRITQKSVTVAF
DESHDFQLNLDRENTYRLLKLANDVTYKRLKKALTTLKKYHSGPASSLIDILLGGSTPSP
ATEIPPLTFYNTTLDPSQQEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQTVKQGLKV
LCCAPSNIAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRR
DIDQVVAKNKKTQDKREKSNFRNEIKLLRKELKEREEATIVQSLAAADVVLATNTGASPD
GPLALLPEGCFDVVVVDECAQALEASCWIPLLRAPKCILAGDHRQLPPTIVSHKAALAGL
SRSLMERLAEKHGAAVVRMLTVQYRMHQAIARWASEAMYHGQLTAHSSVAGHLLKDLPGV
ADTEETSVPLLLVDTAGCGLLELEEGQSKGNPGEVRLVTLHVQALVDAGVQAGDIAVIAP
YNLQVDLLRQSLSNKHPDLEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVA
VTRARRHVAIICDSRTVNNHAFLKTLLGYFTEHGEVRTAFEYLDDIVPENYTHEGSQGHS
RPPKPKGPATFIRKPASEQESGKEAKAAAGQGRRKPSEKPSGSQAHSQPGSNVGGSDRTG
GTDHTEHFRAMIKEFLAGKEAQLEFPTSLSSHDRLRVHQLAEEFGLKHDSTGEGRARHIT
VSRKSPAGSGGVAPRPPSPPSPTQAEPEPQAEQPLEQPNGPTQLDLKALHLERLQRQQGS
QAQPAKVPPGGGSRPQKAPQKKKKKETKAPATALPHEEDFDALVSAVVKADNTCSFSKCS
ASTTTLGQFCMHCSRRYCLSHHLPEIHGCGEKARAHARQRISREGVLYPGSGTKDRTLDP
AKRAQLQRRLDKKLGELSSQRTSKKKEKERGT
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatggcctcgtccactgtggagagttttgtggcccagcagctggagctgctg
gagctggagcggaacgccgaggtagaggagcgcaggtcctggcaggaacacagttccctg
aaagagctccagagccgaggggtgtgtttgctgaagctccaggtatctagccaacgcact
gggctgtatggacagcgactggtcacctttgagcccaggaaatttgggcctgcagtggtg
cttcccagtaatagcttcacttctggtgatatcgtgggtctatatgatactaatgaaagc
agccagctggccactggggtcctgacccgcattacccaaaaatcagtcacagtggccttt
gacgaatctcatgatttccagttgaacctggaccgagagaatacctacagattgctgaag
ctcgccaatgatgtcacctacaagcgtctgaagaaagcactgacgacattgaagaagtac
cactctgggccagcatcctcgctcatagacatcctgttgggtggctccacccccagtcct
gccactgaaatacccccactgaccttctacaacacgaccctggacccttcccaacaagaa
gctgtgtcctttgcactggcgcagaaagaacttgccatcatccacgggcctcctggcact
gggaaaaccacaaccgtggtggaaattatcctccaaactgtgaagcagggattaaaggtt
ctgtgctgtgctccctccaacatcgctgtggacaacctggtggagcgcctggctctgtgc
aagaagcagattctgcgcctgggccacccagcccgcctcctggagtccgttcagcagcac
tcactggacgcagtgctagcacgcagtgacaatgcccagattgtcgctgacatcaggagg
gacatcgaccaggtcgttgccaagaacaaaaagacccaggataagagagagaaaagtaac
tttcgaaatgaaattaagctgctaaggaaggaactgaaggagagggaggaagcaaccata
gtccagagcctcgctgcggcagatgtggtcctagccaccaacacaggtgcatctcccgat
ggcccgctggcactgctgcctgagggctgctttgatgtggtggtggtggacgagtgtgcc
caggcgctggaagccagctgctggatccctctgctgagggcgccaaagtgtatcctagcc
ggagaccacagacagctgccacccaccattgtctctcacaaggcggcactggctgggctg
tcccgcagcctgatggagcgcctggcagagaagcatggtgccgccgtggtacggatgctg
accgtgcagtaccggatgcaccaggccatcgcgcgctgggcctcggaggccatgtaccac
gggcagcttactgcccattcctctgtggcgggacacctcctgaaggacctcccaggtgtg
gctgacacggaggagacaagtgtccccctgctgctcgtagacacagccggctgtgggctg
ctggagctggaggagggccagtccaagggaaacccgggcgaagttcgcctcgtcactttg
catgtccaggctctggtggatgcgggggtccaggcaggtgacattgctgtcattgcgccc
tacaaccttcaggtggatctgctcagacagagcctctccaacaagcaccccgacctcgag
atcaagtctgttgatggcttccaaggccgagagaaggaggcagtgatcctgacctttgtc
aggtccaacaggaaaggtgaagttggttttctggctgaggacaggcggatcaatgttgct
gtcacccgtgctcggcgccacgtggctatcatctgtgattcccgcactgtcaacaaccac
gcatttctcaagaccctgctgggttatttcacagagcatggggaggtgcgcacagccttt
gagtacctggatgacatcgtccctgagaactacacccacgagggctcccagggccacagc
cggccccccaagcccaagggccctgccaccttcatcaggaagcctgccagtgaacaggag
agtggcaaagaggccaaagcagccgccggacagggccgaaggaagccgagtgagaagccg
tcaggctctcaagcccactcccagcccggctctaatgtaggtggctctgacagaactgga
ggcacggaccacacagagcactttcgggccatgatcaaggagtttttggccggcaaggag
gcacagctggagttccccacatctctgagctcccacgacaggcttcgagtccaccagtta
gctgaggagttcgggctgaagcacgacagcactggcgaggggagggcacggcacatcacg
gtgagcaggaagagccctgcaggttctggcggtgtggccccgaggcctccctccccccca
agccccacacaggctgagcccgagccacaggcagaacagcctctggagcagccaaatggc
cccacacagctggatctgaaggcgctgcacctggaaaggctgcagcgacagcaaggcagc
caggcccagccagccaaggttccccctggtgggggttcacgaccacagaaggctccacag
aagaaaaagaaaaaagaaacaaaagctccagccacggctctgccccacgaggaggacttt
gacgccctggtgtcagccgtggtgaaggctgataacacctgtagcttctccaagtgctcg
gccagcaccaccaccctgggccagttctgcatgcactgcagccgccgctactgcctcagc
catcacctgcccgagatccatggctgtggtgaaaaggctcgcgcccacgcccggcagagg
attagccgggaaggagtgctctacccaggcagtgggaccaaggacaggaccctggaccca
gccaagagggcccagctgcagaggaggctggacaagaagctgggggagctcagcagccag
aggacaagcaagaagaaggagaaggagagagggacatga
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