KEGG   Meriones unguiculatus (Mongolian gerbil): 110548072
Entry
110548072         CDS       T05884                                 
Symbol
Ddb1
Name
(RefSeq) DNA damage-binding protein 1 isoform X2
  KO
K10610  DNA damage-binding protein 1
Organism
mun  Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03420  Nucleotide excision repair
mun04120  Ubiquitin mediated proteolysis
mun05161  Hepatitis B
mun05170  Human immunodeficiency virus 1 infection
mun05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mun00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110548072 (Ddb1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110548072 (Ddb1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    110548072 (Ddb1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110548072 (Ddb1)
   05161 Hepatitis B
    110548072 (Ddb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mun04121]
    110548072 (Ddb1)
   03400 DNA repair and recombination proteins [BR:mun03400]
    110548072 (Ddb1)
Ubiquitin system [BR:mun04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     110548072 (Ddb1)
DNA repair and recombination proteins [BR:mun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110548072 (Ddb1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110548072 (Ddb1)
SSDB
Motif
Pfam: MMS1_N CPSF_A Beta_propel
Other DBs
NCBI-GeneID: 110548072
NCBI-ProteinID: XP_021491727
LinkDB
Position
1:28815255..28840275
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSNQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQFDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcgcagaagcctaccgcagtgaacggctgtgtgact
ggacactttacttcagcagaagatctgaacctgttgattgctaaaaacacaagattagag
atctatgtggtcactgcagagggccttcggccggtcaaagaggtgggcatgtatggaaag
attgcagtcatggagcttttcaggcccaagggagagagcaaagacctgctgttcatcttg
actgctaagtacaatgcctgcatcctggagtataagcagagtggcgaaagcattgatatc
attacaagagcccatggcaatgtccaggaccgtattggtcgcccatcagagactggcatc
attggcatcattgaccctgaatgccggatgattgggcttcgactctacgatggccttttc
aaggtcattccactagaccgagacaataaagagctcaaggcctttaatatacgcctagaa
gaattgcatgtcattgatgtcaagttcctgtatggttgtcaagcacctaccatttgcttt
gtctaccaggatcctcaggggcggcatgtgaaaacttatgaggtgtctcttcgagagaag
gagttcaacaagggcccttggaaacaggagaatgtagaagctgaagcttcaatggtgatc
gcagtcccagagccttttggaggagccatcatcattggacaggaatcaatcacttatcac
aatggtgacaaatacctggcaattgcccctcctatcattaagcaaagcactattgtgtgc
cacaaccgggtggatcctaatggctcacgataccttctgggagatatggaaggacgactc
ttcatgctgcttttagagaaggaggagcagatggatggcactgtcaccctcaaggatctc
cgagtggaactacttggagagacctccattgcagagtgcttaacatacctcgataatggt
gttgtatttgttgggtctcgcctaggtgactcccagcttgtaaagctcaacgtcgacagc
aatgaacaaggctcttacgtagtggccatggaaacttttaccaatttaggacccattgtg
gatatgtgtgtggtggacctagagaggcagggacagggtcagctggtcacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaacggaattggaatccatgagcatgcc
agcattgacttaccaggcatcaaaggtttatggccactgcggtctgaccccagtcgggag
actgatgacactttggtactgtcttttgtgggccagacgagagttctcatgctaaacgga
gaggaagtggaagaaacggagctgatgggctttgtggatgatcagcagactttcttttgt
ggcaatgtggctcatcagcaacttatccagatcacttcagcatctgtgaggttggtgtct
caagagcccaaagctttggtcagtgagtggaaagagcctcagggcaagaacatcagtgtg
gcctcctgcaacagcaaccaggtggttgttgctgtgggaagggcactatactaccttcag
atccatcctcaggagctccggcaaatcagccacacagaaatggaacatgaagtggcttgc
ttggatatcaccccattaggggatagcaatggcctgtctccactttgtgctattggcctc
tggacagacatctctgcccgtatcttgaagctcccatcctttgaactactgcacaaggag
atgctgggtggagagatcattcctcgatctattctgatgaccacttttgagagtagccac
taccttctttgtgccttgggagatggggcgcttttctactttgggctcaatatcgagaca
ggcttactgagtgaccgtaaaaaggtgacattgggcacccagcctacagtgttgaggaca
ttccgttctctttctaccaccaacgtctttgcttgctcggaccggcccactgtcatttat
agcagcaaccacaagttggtcttctctaatgtcaacctcaaggaggtgaattatatgtgt
cccctcaactctgatgggtatcctgacagtctggcattggccaataacagcaccctcacc
attggcaccattgacgaaatccagaaactccatattcgcacggttcccctctacgaatct
cccaggaagatctgctatcaggaagtgtctcagtgctttggggtcctttccagccgcatt
gaagttcaggataccagtggaggcacaactgctttgaggcccagcgccagcacccaggcc
ctgtccagcagcgtcagctccagcaagctattctctagcagtactgctcctcacgagacc
tccttcggagaagaggtggaggtgcacaacctcctcatcattgaccagcacacctttgaa
gtgcttcatgcccatcagtttctacaaaacgagtatgccctcagcctggtctcctgcaag
ttgggtaaagaccccaacacatacttcattgtgggcacagccatggtgtatcctgaagag
gcggagcccaagcagggtcgtattgtggtcttccagtattccgatggaaaactacagact
gtggctgaaaaggaagtgaaaggggctgtgtactctatggtggagtttaatgggaagttg
cttgccagcattaatagcacggtgcggctttatgagtggaccacagaaaaggagctccga
actgagtgtaatcactacaacaacatcatggctctctacctgaagaccaagggtgatttc
atcctggtgggcgacctcatgcgctcagtgctgctgcttgcctacaagcccatggaagga
aactttgaagagattgcccgagactttaatcccaactggatgagtgcagtggaaatcttg
gatgatgataattttctgggagctgaaaatgcctttaatttgtttgtgtgtcagaaggac
agtgctgccaccactgatgaggagcggcagcacctacaggaggttggtctcttccacctg
ggcgagtttgtcaatgtgttctgccatggctccctagttatgcagaatctgggcgagact
tctacccctacacagggctcggtactctttggcacagtcaacggtatgatagggctggtg
acctccctctcagagagctggtataacctcctgttagacatgcagaaccgactcaataag
gtcatcaaaagtgtgggcaagatcgagcactccttctggagatcctttcacactgagcga
aagacagaaccagccacaggcttcatcgacggtgacctgattgaaagtttcctagatatt
agccgccccaagatgcaggaagttgtggcaaacctgcagtttgatgatggcagtggtatg
aagagagaggcgactgcagatgacctcatcaaagtcgtggaggagctaactcggatccat
tag

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