KEGG   Meriones unguiculatus (Mongolian gerbil): 110548822
Entry
110548822         CDS       T05884                                 
Symbol
Alyref
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
mun  Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03013  Nucleocytoplasmic transport
mun03015  mRNA surveillance pathway
mun03040  Spliceosome
mun05014  Amyotrophic lateral sclerosis
mun05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110548822 (Alyref)
  09122 Translation
   03013 Nucleocytoplasmic transport
    110548822 (Alyref)
   03015 mRNA surveillance pathway
    110548822 (Alyref)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110548822 (Alyref)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110548822 (Alyref)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mun03019]
    110548822 (Alyref)
   03041 Spliceosome [BR:mun03041]
    110548822 (Alyref)
Messenger RNA biogenesis [BR:mun03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110548822 (Alyref)
    TREX complex
     110548822 (Alyref)
Spliceosome [BR:mun03041]
 Complex C
  Other components
   EJC/TREX
    110548822 (Alyref)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110548822 (Alyref)
SSDB
Motif
Pfam: RRM_1 FoP_duplication F07F6_N
Other DBs
NCBI-GeneID: 110548822
NCBI-ProteinID: XP_021493090
LinkDB
Position
7:2116474..2119929
AA seq 256 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQAAARVSRGGGPLRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSINRGGMTRNRGSGGFGGGGTRRGTRGGSRGRGRGAGRNSKQQLSAE
ELDAQLDAYNARMDTS
NT seq 771 nt   +upstreamnt  +downstreamnt
atggccgacaaaatggacatgtctttggacgacatcattaagctgaaccggagccagcga
ggcggtcgcggcgggggccggggccgcggcagggccggctcccagggcggccgcggcggc
gcagtgcaggccgccgcgcgggtgagccgaggcggcgggcctctgaggaaccggcccgcc
atcgctcgcggcgccgcaggcggcggcggcaggaaccggccggcaccctacagcagaccg
aaacaactccccgacaagtggcagcacgacctattcgacagcggcttcgggggtggagcc
ggcgtggagacgggtgggaagctgctggtgtccaacctggactttggagtgtcagacgca
gatattcaggagctcttcgctgagtttggaacgctgaagaaagcagctgtgcactacgat
cgctccggccgaagtttagggacggcagacgtgcactttgaacggaaggcggatgccctg
aaggccatgaagcagtacaacggtgtccctttggatggccgtcctatgaatatccagctc
gtcacatcacagattgatacacagcgaagacctgcacagagcataaacagaggcggcatg
acaagaaaccgtggctctgggggttttggcggaggcggcacccggagagggacccgtggg
ggcagccggggaagaggcagaggcgccggcaggaactcaaagcagcagctctccgcggag
gagctggacgcacagcttgatgcttacaacgccaggatggacaccagctaa

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