Meriones unguiculatus (Mongolian gerbil): 110548884
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Entry
110548884 CDS
T05884
Symbol
Col4a1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04151
PI3K-Akt signaling pathway
mun04510
Focal adhesion
mun04512
ECM-receptor interaction
mun04820
Cytoskeleton in muscle cells
mun04926
Relaxin signaling pathway
mun04933
AGE-RAGE signaling pathway in diabetic complications
mun04974
Protein digestion and absorption
mun05146
Amoebiasis
mun05165
Human papillomavirus infection
mun05200
Pathways in cancer
mun05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110548884 (Col4a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110548884 (Col4a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110548884 (Col4a1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110548884 (Col4a1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
110548884 (Col4a1)
09154 Digestive system
04974 Protein digestion and absorption
110548884 (Col4a1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110548884 (Col4a1)
09162 Cancer: specific types
05222 Small cell lung cancer
110548884 (Col4a1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110548884 (Col4a1)
09174 Infectious disease: parasitic
05146 Amoebiasis
110548884 (Col4a1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
110548884 (Col4a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mun04147
]
110548884 (Col4a1)
00536 Glycosaminoglycan binding proteins [BR:
mun00536
]
110548884 (Col4a1)
Exosome [BR:
mun04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110548884 (Col4a1)
Glycosaminoglycan binding proteins [BR:
mun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110548884 (Col4a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
110548884
NCBI-ProteinID:
XP_021493208
LinkDB
All DBs
Position
4:complement(6266937..6377849)
Genome browser
AA seq
1669 aa
AA seq
DB search
MGPRLSACLLLLLGALLLHEERSRAAAKGDCGGSGCGKCDCHGVKGQKGERGFPGLQGVI
GFPGMQGPEGPHGPPGQKGDAGEPGLPGTKGTRGPPGAAGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFSGNPGPPGLPGMKGDPGEILGHVPGTLLKGERGFPGI
PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGSSFQGPKGDKGEQGVSGPP
GVPGQAQVKEKGDFAPTGEKGQKGEPGFQGMPGVGEKGEPGKQGPRGKPGKDGEKGEKGS
PGFPGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVVGTRPLGEKGDRGYPGTPGIRGEPGP
KGYPGIQGQPGPPGFTIPGQPGAPGFPGERGLKGDQGLPGVSLPGPSGRDGAPGPPGPPG
PPGQPGHTNGIVECQPGPPGDQGPPGTPGAPGLTGEMGEKGQKGESCLACDTEGLRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGSPGLMGQPGAKGEPGEIFFDMRLK
GDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT
GPPGPPGIGSIGPIGEKGHAGFPGSPGSPGLPGPKGEAGKVVPLPGPPGAAGLPGSPGFP
GPQGDRGLPGIPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGERGLPGSPGRPGFNG
LPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGNIGGPGFPGEQGLIGPPGLQGI
RGDPGPPGVQGPAGPPGVPGVGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG
PKGDKGSQGLPGLTGQSGLPGLPGQQGAPGLPGFPGSKGEMGVMGTPGQPGSPGPAGTPG
LPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMDHVDMGSMKGQKGDQGEKGQIG
PTGDKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGLSGTPGAPGLPGPKGSVGGMGLPG
LPGEKGVPGIPGSQGVPGLPGEKGAKGEKGQSGLPGVGIPGRPGDKGDQGLTGFPGSPGE
KGEKGSAGTPGMPGSPGPRGSPGSIGHPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGT
PGPVGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGTKGDKGSKGEVGFPGSAGSP
GIPGAKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPPGFPG
IDGSKGEKGNPGWPGSPGIPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQKG
LPGLQGIKGDQGDQGIPGPKGLQGPPGPPGPYDVIKGEPGLPGPEGPPGLKGLQGPPGPK
GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTTDDPLCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcagcgcctgccttctgctgctgctcggcgcccttctgctccacgag
gagcgcagcagggccgccgcgaagggtgactgtggtggctctggctgtggaaaatgtgac
tgtcatggcgtgaagggacaaaagggagaaagaggctttccagggttacaaggtgtcatt
gggtttcctgggatgcaaggacccgaggggccacatggaccaccaggacagaagggtgac
gctggagaacctggacttccaggcacgaaagggacaaggggaccccctggagcagctggc
taccctgggaatcctggacttcctggtattcctggccaagatggccctccaggtccccca
ggtatcccaggatgcaacggtacaaagggagagagagggccactcggtcctcccggcttg
cctggattcagcggaaatcctggaccaccggggttaccaggaatgaagggagaccctgga
gagattctcggccacgttcctggcacactgttgaagggggagagaggatttcctggcatc
cctggggcaccgggctcaccaggattgccgggactccagggacctgtcggtcctccggga
tttactgggccaccgggtcctccaggccctcctggcccacctggagaaaaggggcagatg
ggctccagcttccaaggaccaaagggtgacaagggcgagcaaggggtcagtggtcctccc
ggagtacccggacaggcacaagttaaggaaaaaggagacttcgccccaacaggagaaaag
ggtcagaaaggtgaacccggcttccagggaatgccaggagtgggagagaaaggtgaacct
ggcaagcaagggcctcgggggaaacctggaaaagatggtgagaaaggagagaaggggagt
ccgggctttcctggtgattctgggtatccaggactcccaggccggcagggccctcaggga
gagaagggcgaagctggacttccaggcccccctggaactgtggtgggcaccaggcctttg
ggagagaaaggagacagaggctacccaggaacgccagggataagaggagagccaggcccc
aaaggttaccctggaatacaaggccagccaggccctccaggcttcactattccaggccag
cctggtgctcctggcttcccaggcgaaagaggattaaaaggtgaccaaggattgccaggc
gtgtctttaccaggaccaagcggaagagatggcgccccagggcctcctggtcctcctgga
ccccctgggcagccaggccacacaaatggcattgtggagtgtcagcctggaccacctggg
gaccagggtcctcctgggactccaggagcgccaggcttgacaggagaaatgggagagaaa
ggtcagaaaggagagagctgccttgcgtgtgacacagaaggacttcgaggccctcctggg
ccacagggccccccaggagagattggtttccccggacagccaggggccaaaggtgaccga
ggtctgcccggcagggatggtcttgaaggattgccgggtccgcaaggttcaccaggcctt
atgggccagcctggagctaagggagagcctggcgagatattttttgacatgcgcctcaaa
ggtgacaaaggagatccaggttttccaggacagccaggcatgcccggaagagcaggaact
cctggaagagatggccacccagggctccctggacccaaaggctccccgggttcggtagga
ttgaaaggagaacgaggtccccctggaggagttggcttccccgggagtcgtggtgacacc
ggccctcctggacccccaggaatcggttccattggtcccattggtgaaaaaggacacgca
ggctttcctggaagcccagggtccccaggccttccaggtccaaagggtgaagcaggaaag
gttgtcccactccctggcccccctggagctgcaggacttccaggatcccctgggttccca
gggccacaaggtgaccgaggtctcccaggaatcccaggacggccaggcatcccgggagag
aagggtgccgtgggccagccagggattggatttcccgggcttcctggccccaaaggtgtg
gatggcttgcctggagagagaggcctacccggcagtccaggtcgtcctggattcaatggc
ttacctggaaacccaggaccacaaggccaaaagggagaacctggcattgggctaccagga
ctcaaggggcagccaggccttccgggcattcctggtacgccaggagagaagggcaacatc
gggggaccaggcttccctggagaacagggcttaatcggccctcctggactgcaggggatc
agaggtgacccaggacctcctggtgttcaaggccctgcaggtccaccaggggttccagga
gtaggaccacctggagccatgggccctcccggaggacaaggaccaccagggtcatcaggt
ccacctggagtcaaaggagagaagggcttccctggattcccaggcctggatatgcctggc
cccaaaggagataaaggttctcaaggacttcctggccttacagggcagtcagggcttcct
ggccttcctggacagcagggggctcctggacttccagggttcccaggttctaaaggagaa
atgggcgtcatgggaactccaggacaaccaggctccccaggaccagctggcaccccaggg
ttacctggagaaaaaggggaccatggccttccaggctcctcaggacctaggggtgaccct
ggcttcaaaggtgacaaaggggacgttgggcttcccggcatgccaggatcgatggatcat
gtggacatgggcagcatgaagggacagaaaggagaccaaggagaaaaaggacaaatcgga
cccactggtgataaaggttcccgaggagatcctggaacccctggagttcctgggaaggat
gggcaggcaggacaacctggacagccaggacctaaaggtgacccaggtcttagtggaaca
ccaggagcccctggactccctggacccaaaggatcggttggaggaatgggcttgccaggt
ttacctggagaaaaaggcgtccccggcatccctggctcgcagggtgtccccggcttacct
ggagagaaaggagcaaaaggagagaaggggcagtcaggtctgcctggcgttgggattcct
gggcggccaggcgacaagggagaccaggggctcactggtttcccgggcagccctggtgag
aagggagaaaaaggcagtgccggaaccccggggatgccagggtccccaggccccagaggt
tctccagggagcatcggccatccaggaagcccgggcctacctggagagaagggagacaaa
ggcctgccagggctggatggcattcctggtgtcaaaggagaagcgggtctccctggcact
cctggccctgtaggcccagccggccagaagggagagcctggcagtgatggaatcccaggg
tcggcaggagagaagggtgaaccaggactgccaggaagaggcttccccggcttcccaggc
accaaaggagacaaaggttccaagggggaagtgggcttccctggctcagctggaagtcct
ggaattcctggagcaaaaggcgagcaaggattcatgggtcctccgggccctcaaggacaa
ccaggcttacctggcactcctggtcatcctgtggaggggcccaaaggagaccgaggacct
cagggtcaacctggcctgccagggcatccgggacctatggggcctccaggcttcccagga
atcgatgggtcaaaaggcgagaagggaaatccaggttggccaggatctcctgggattcca
ggccctaagggagaccccggattccaaggcatgccgggcattggtggctctccagggatc
acaggttcaaagggagatatgggaccgcccggagttccaggattccaaggtcagaaaggt
cttcccgggctgcaggggataaaaggagatcagggagatcaaggcatacccggccctaaa
ggccttcagggtcctcctgggcccccaggtccctacgatgtcatcaaaggagaaccaggg
ctccctggtcctgagggtcctcctggtctgaaaggactccagggaccaccgggtccaaaa
ggacagcaaggtgtgacaggctcagtaggcttgcctggacctccaggtgttcccgggttc
gatggtgcccctggccagaaaggagagactggaccctttggaccacctggtccgagaggg
tttcctggtccaccaggccctgatgggctgccgggatctatgggtcccccgggtaccccg
tctgtggaccatggcttccttgtgaccaggcatagtcagacaacagacgaccccctgtgt
cctccagggaccaaaattctttaccatggctactctctgctctatgtgcaaggcaacgag
cgggcccacgggcaggacttgggcacggctggcagctgtctgcgcaagttcagcacgatg
cccttcctcttctgcaacatcaacaacgtgtgcaacttcgcctccaggaacgactactcg
tactggctgtccacgccggagcccatgcccatgtccatggcgcccatctctggggacaac
atccggcccttcattagcaggtgtgcggtttgtgaggcccccgccatggtgatggcagta
cacagtcagaccatccagatcccgccctgccccaacggttggtcctcgctgtggattggc
tattccttcgtcatgcacaccagcgctggtgccgagggttctggccaggcccttgcatcc
cccgggtcctgtctggaagagtttagaagtgctcccttcatcgagtgccacggccgcggg
acgtgcaattactacgcgaacgcttacagcttttggctcgccaccatagagagaagcgag
atgttcaagaagcctacgccgtccaccttgaaggccggggagctgcgcacgcacgtcagc
cgttgccaagtgtgcatgagaagaacataa
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