Meriones unguiculatus (Mongolian gerbil): 110549953
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Entry
110549953 CDS
T05884
Symbol
Pabpc4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03015
mRNA surveillance pathway
mun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110549953 (Pabpc4)
09123 Folding, sorting and degradation
03018 RNA degradation
110549953 (Pabpc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110549953 (Pabpc4)
03041 Spliceosome [BR:
mun03041
]
110549953 (Pabpc4)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110549953 (Pabpc4)
mRNA cycle factors
Stress granule specific factors
110549953 (Pabpc4)
Spliceosome [BR:
mun03041
]
Complex C
Other components
Complex C specific factors
110549953 (Pabpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
110549953
NCBI-ProteinID:
XP_021495141
LinkDB
All DBs
Position
3:complement(27832871..27849270)
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AA seq
660 aa
AA seq
DB search
MTAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSALRQSGPRPALRHLAPTGNAPASRGLPTS
AQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPAAVPNLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGTVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgctgccagcagctaccccatggcctccttatacgtgggcgacctgcactcg
gacgtcaccgaagccatgctgtatgaaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgtcgctccctgggttatgcctacgtcaacttccag
cagccagctgacgccgagagggccctggataccatgaactttgacgtgatcaaggggaag
ccaatccgaatcatgtggtctcagagggacccctccttgcggaagtctggcgtgggcaac
gtcttcatcaagaacctggacagatctatagacaacaaggcgctctatgacaccttctca
gccttcggaaacatcctgtcttgtaaggtggtttgtgatgagaatggctctaagggttat
gcctttgtccacttcgagacccaagaggctgccgacaaggccatcgagaagatgaatggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaggagcgggaa
gctgagcttggagccaaggccaaggaattcaccaatgtttatatcaaaaactttggggaa
gaggtagatgatgagaatctgaaagagctctttagccagtttggtaagaccctcagtgtc
aaggtgatgagagatccaagtgggaaatccaaaggctttggctttgtaagttacgaaaaa
cacgaggatgccaataaggctgtggaagaaatgaatggaaaagaaatgagtgggaaagcc
atatttgtaggccgtgcacagaaaaaagtagagcgacaggctgaattgaaacggaaattt
gagcagttgaagcaggagagaattagtcggtaccagggagtgaatctctatattaagaac
ttggatgacaccattgatgatgagaaattaaggaaagagttttctccttttggatcaatc
accagtgctaaggtaatgctggaagatggaaggagcaaagggtttggctttgtctgtttc
tcatctcctgaagaggcaaccaaagcggtcaccgagatgaacggacgcattgtaggctcc
aagccgctgtacgtcgccctggcccagaggaaagaggagcggaaggcccacctgacaaat
cagtatatgcagcgtgtggctgggatgagagcgctccctgccaatgccatcttaaatcag
ttccagcctgctgccggcggctactttgtgccggcggttccacaggctcaaggaagacct
ccatattacacgcctaaccagttagcacagatgaggcctaatccacgctggcagcaaggc
gggagacctcagggcttccaaggaatgccaagtgctctgcggcaatctgggcctcgtcca
gctcttcgccacctggctccaactggtaatgctccggcctctcgtggccttcctacttct
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggcgtgcctgcagctgtgcca
aaccttgcacctcgtgccgcagtcgctgctgctgctccgagggccgtggcgccttacaaa
tacgcctccagtgtccgcagccctcaccctgccatccagccactgcaggcaccgcagcct
gcagtccatgtccaggggcaggagccactgacggcctccatgttggctgcagcacccccc
caggaacagaagcagatgctgggggagcgcttgttcccgctcatccagacaatgcattca
aacctggctggaaagatcacgggaatgctgctagagatcgacaactctgagctgctccac
atgctggagtccccggagtccctccgctccaaggtggatgaagctgtggcagtcctgcag
gctcatcatgccaagaaagaagctgcccagaaggtgggcactgttgctgctgctacctct
tag
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