Meriones unguiculatus (Mongolian gerbil): 110549974
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Entry
110549974 CDS
T05884
Symbol
Pdzrn3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mun04121
]
110549974 (Pdzrn3)
Enzymes [BR:
mun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110549974 (Pdzrn3)
Ubiquitin system [BR:
mun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
110549974 (Pdzrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-TRAF
Sina_ZnF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
110549974
NCBI-ProteinID:
XP_021495172
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All DBs
Position
5:complement(92587245..92816008)
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AA seq
1063 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPSRCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQDLPEHLERCDFAPARCRHAGCGQL
LLRRDVEGHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHEQAVEAFKTAKEPIVVQVLRRTPRTKMFTPASESQLVDTGTQT
DITFEHIMALTKMSSPSPPVLDPYLLPEEHPSSHEYYDPNDYMGDIHQDIDREGLELEEV
GLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGEDTTASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDVDYLGIPVDECERFRELLELKCQVQSAS
PYNLYYPSSPLDAAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESW
MLHHSGFRNYNTSVDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSL
RRMAEGNSEGAAANIEAYRPSAKNLLAITEDSEGSTPNYSPGAKELDPSQALESKERRVS
DGSRSPTASPKLGGAYLPTYHHSPYKHAHIPAHAQHYQSYMHLIQQKSAVEYAQSQMSLV
SMCKDLNSSNSAEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGLTTDDDA
MSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQASDDRKEMNILELSHK
KMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgagttggaccgcttcgacggcgacgtggacccagatctgaagtgcgccctg
tgccacaaggtcctggaggacccgctcaccaccccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtagtacaggagggcagctgcccctcgcgctgtcgcggtcgccta
tcggccaaggagctcaaccacgtcctgcctctcaagcgcctcatcctcaagttggacatc
aagtgcgcgcacgcggcgcggggctgcggccgggtggtcaagctgcaggacctgcccgag
cacctggagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccagctg
ctgctgcgacgcgacgtggagggccacatgcgcgacgcgtgcgacgcgcggcccgtgggc
cgctgccaggaggggtgcgggctgccgctgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgggctctgcgggcgcacaacggcgcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgggccggcaagcgggagaagtcgctggtggcg
cagctggctgccgcgcagctcgaactgcagatgaccgcgctgcgctaccagaagaagttc
actgagtacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggtgaagagaccaagagcctgactcttgtcctgcatcgggactctggctccctgggg
ttcaatatcattggtggccggccctgtgtggacaatcaagatggatcctccagtgaagga
atctttgtatccaaaatagttgacagtgggcctgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaatggcaaagacctatcccgagcaactcatgagcaggct
gtggaagctttcaagacagccaaggagcccatcgtggtgcaggtgttgaggaggactcct
cgaaccaaaatgttcacgcctgcctcagagtcacagctggtagacacaggcacccaaact
gacatcacctttgagcacatcatggccctgacaaagatgtcctcccccagtccacctgtg
ctggatccctacctgctgcctgaagagcacccatcatcccatgaatactatgatccgaat
gactacatgggggacatccatcaggacattgacagggaagggctggagctggaggaagtg
ggcctctacaggatgaacagccaggacaagctgggtctcaccgtgtgctaccggacagat
gacgaagatgacatcgggatttatataagtgagattgaccctaacagtattgcagccaag
gatggacgcatccgtgaaggagaccgcatcatccagattaatgggatagaggtgcagaac
cgtgaagaggccgtggctctgctaaccagtgaagaaaacaagaacttttcattgctgatt
gcaaggcctgagctccagctggacgagggctggatggacgatgaccggaacgactttctg
gatgacttacacatggacatgcttgaggagcagcatcaccaggccatgcagttcactgcc
agtgtgctccagcagaagaagcatgaggaagacggtgggaccacagacacagccaccatc
ttatccaaccagcacgagaaagacagcggcgtggggcgaacggatgagagcacccgcaac
gacgagagctcggagcaggagaacaacggggaagacaccacggcctcctccaacccgctg
gcgggccagaggaagctgacctgcagccaggacaccctgggcagtggcgacctgcctttc
agcaacgagtctttcatctctgccgactgtacggatgtggactacctgggcatccccgtg
gatgagtgtgagcgtttccgtgagctgctggagctcaagtgccaggtgcagagcgccagc
ccctacaacctgtactaccccagcagcccactggacgctgcgggcaagagcgaccccgag
agcgtggacaaggagctggagctgctcaacgaggagctgcgcagcatcgagctggagtgc
ctgagcatcgtgcgcgcgcacaagatgcagcagctcaaggagcagtaccgcgagtcctgg
atgctgcaccacagcggcttccgcaactacaacaccagcgtggacgtgcgccgccacgag
ctctcggacatcaccgagctgccggagaagtcagacaaggatagctcgagcgcctacaac
accggggagagctgccggagtaccccactcaccctggagatctccccggacaactccctg
cggagaatggccgagggcaatagcgagggggccgcggccaacatcgaagcttataggcca
tccgccaagaacctgcttgccatcactgaggattccgaaggaagcacccccaactacagc
cctggtgccaaagagctggatcccagccaggccttggagagcaaagagcgccgagttagc
gacggcagcaggagccccaccgccagcccgaagctgggcggtgcctacctgcccacgtac
caccactccccgtacaaacacgcgcacatcccggcgcacgctcagcactaccagagctac
atgcacctgatccagcagaagtcggcagtggagtacgcgcagagccagatgagcctggtg
agcatgtgcaaggacttgaactcttccaactcggccgaacccaggatggagtggaaagtc
aagatccgcagtgacgggacgcgctacatcaccaagaggccagtgcgggacaggctgctg
cgcgagcgtgccctgaagatccgcgaggagcgcagcggcctgaccacggatgacgacgcc
atgagcgagatgaagatggggcgctactggagcaaggaggagcgcaaacagcatctggtg
aaggccaaggagcagaggaggaggcgggagttcatgatgcagagcaggctggattgtctg
aaggagcagcaggcctccgacgacaggaaggagatgaacatcctggaactgagccacaaa
aagatgatgaagaagagaaacaaaaagatctttgacaactggatgaccatccaggaactc
ctaacccatggcacgaaatcgccagacggcactagggtatacaattccttcctgtcggtg
actactgtataa
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integrated database retrieval system
