Meriones unguiculatus (Mongolian gerbil): 110551169
Help
Entry
110551169 CDS
T05884
Symbol
Cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110551169 (Cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110551169 (Cnot1)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110551169 (Cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110551169 (Cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
110551169
NCBI-ProteinID:
XP_021497239
LinkDB
All DBs
Position
10:32227194..32310291
Genome browser
AA seq
2382 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSEGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDFIYRPWKHAEGQLSFIQHSLINPEVFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPAETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPGGL
GTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHFS
KEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRF
FPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRF
KNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQ
AQAQVPTKAPLAGQVNTMVTTSTTTTVAKTVTVTKPTGVSFKKDVPPSINTTNIDTLLVA
TDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSI
EPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGM
ITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVFRPPNPWTMA
IMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPKK
DVKQPEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTIP
LFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIAA
HHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNCE
LACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKV
GGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELEQ
HLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADLL
LRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQ
YDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRGN
APEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVN
LYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRAQ
AEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVL
LQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGF
VYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKG
TLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDM
LSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQL
INALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQL
RYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPA
FKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgtctattttcacatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagacacagtttctgattcaggagtgtgcctca
ctgattacaaagccaaattttatctcgacattgtcatatgccattgataatccattgcac
taccagaagagtttaaagcctgcgccccacttatttgcccagctgagtaaagttctcaag
ttaagtaaagtacaagaggtaatttttggtcttgcccttttgaattcttctagctcagat
ctcaggggttttgctgcccagtttatcaagcagaagcttccagatctcctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
cttcacctcctactctcccatctcctttttgggcagaagggagcctttggagttggccag
gaacagatagacgcttttcttaagacactgcgcagagattttccccaagagcgttgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggattttg
cctgattctggaggggtagctaaaaccatgatggagagctctctggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgccagggttttgggaatgatggctcggact
cattcaggattaacagatggtattccattacagagcatctctgctcctggcagtgggatc
tggagtgatggaaaagataaaagtgagggcgctcaggcacacacatggaatgtagaggtc
ttgattgatgttcttaaagaactgaacccaagtttgaatttcaaggaagtaacctatgaa
ctggaccatcctggatttcaaattcgtgacagcaaaggacttcacaatgtggtttatggt
attcagagaggcctaggcatggaagtgtttccagttgattttatatataggccttggaaa
catgcagaaggccagctgtccttcatccagcattccctgataaatccagaggtcttctgc
tttgctgactacccctgtcatactgttgccactgatattttgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaaaagcttggatttgattgaatctctcctgaggctt
gcagaggttgggcagtatgagcaagtgaaacagctcttcagcttccctatcaaacattgt
ccagacatgttggtattggccttactacaaatcaacacctcctggcacacattgcgccat
gaactcatctctactttgatgccaattttccttggaaaccatcctaactctgccattatt
ttgcactatgcatggcatgggcagggacagtctccatcaattcgccaacttataatgcat
gcaatggcagaatggtatatgagaggggagcaatatgatcaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcgatgctgctaaacggcactccgtttgcc
tttgttattgaccttgctgcacttgcttcacggcgagaatacctcaaacttgacaagtgg
ttgacagacaaaataagagaacatggggagccttttatacaagcatgtatgactttttta
aagagaaggtgcccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctgctgaaactctagcaacaatgttggcttgtctacaggcttgtgcaggg
agtgtttctcaggagttatcagagaccatcctcaccatggtagccaattgcagtaatgta
atgaataaggccagacagccaccacctggagttatgccaaaaggtcgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcgtctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccaccactttcaacccca
aatcagacaacagcattcagtggtattggaggactttcatcacagcttccaggtggtctt
ggcacaggaagcctgactggtataggaactggggcccttggacttcctgcagtgaacaac
gacccttttgtacagaggaaactgggcacctctggactcaaccagcctacattccagcag
agtaagatgaaaccttccgacttgtctcaggtgtggccagaggcaaatcagcactttagt
aaagagatagatgatgaagcaaacagctatttccagcgaatatataatcacccaccacat
ccaaccatgtctgttgatgaggttttagaaatgctacagagatttaaagactctactata
aaaagagagcgagaagtatttaactgtatgctgaggaacttatttgaagaatatcggttt
ttcccccagtaccctgataaagaattacatataacagcctgcctgtttggtgggataatt
gaaaaaggactggtcacttacatggcattgggtctggccctgcgatatgttcttgaagcc
ttacggaagccttttggatccaaaatgtattattttggtattgctgcactagatagattt
aaaaatagattgaaggactatcctcagtattgtcagcacttggcttctattagtcacttt
atgcagtttccacatcatttgcaggagtacatcgagtatggacaacagtctcgagatcct
cctgtgaaaatgcagggctctatcacgacccctggaagtattgcactggctcaggcccag
gctcaggcccaggttccaacaaaagctcctcttgcgggtcaggttaacacaatggtaacc
acctcaacaaccacaactgttgctaaaacagttacagtcactaagccaacaggagtcagc
tttaagaaagatgttccaccttctataaatacaacaaatatcgatacattgcttgtggcc
acagatcaaactgagaggattgtggagcccccagaaaacatacaagagaaaattgctttt
attttcaacaatctctcacagtcaaatatgacacagaaggttgaagagcttaaagaaact
gtgaaggaagaatttatgccttgggtttcccagtatctagttatgaaaagagtcagtatt
gagccaaactttcacagcctatattcaaactttcttgacacattgaagaatcccgaattt
aacaagatggttctgaatgagacctacagaaacattaaagtgctgctgacctctgataaa
gctgcagccaatttctcagatcgttctttgttgaagaacttgggacattggctaggaatg
atcacattagctaaaaataaacccatcttacacacggatttagatgtgaaatctttgctg
ctagaggcttatgttaaaggacaacaagagttgctgtatgttgtaccttttgttgccaaa
gttctagagtccagcattcgtagtctggtttttagaccaccaaacccttggacaatggca
attatgaatgttttggctgaattgcaccaggagcatgacttaaagttaaacctgaagttt
gaaattgaggtgctctgtaagaacctggcattagacatcaatgagctcaaacctggaagc
ctgctgaaagataaagatcgccttaagaacttagatgaacaactctctgccccaaagaaa
gatgtcaagcagccagaagagcttcctgccatcacgacaacaacaacttctacaacacca
gctaccagtactacgtgtacagccacagttccaccacagccacagtacagctaccacgac
atcaatgtctattctcttgcaggcctggcaccgcacattactctaaaccctacaatccct
ttgtttcaagctcatccacagttgaagcaatgtgtgcggcaagcaattgaacgggctgtc
caggaactagtccatcctgtagtagatcggtcaattaagatcgccatgactacgtgtgaa
cagatagtcagaaaagattttgccctggattctgaggaatctagaatgcgaatagcagct
catcacatgatgcggaacttgacagctggaatggctatgattacttgcagggagccttta
ctgatgagcatatctactaacctaaaaaacagttttgcctcagcccttcgtactgcatcc
ccacaacaaagggagatgatggatcaggctgctgctcagttagctcaggacaattgtgaa
ttagcttgttgttttattcagaaaactgcagtggagaaagcaggccctgagatggataag
agattggcaactgaatttgagctgagaaaacatgctcggcaagaaggacgcagatactgt
gatcctgttgtattaacatatcaagcagaacggatgccagagcaaatcaggctgaaagtt
ggtggtgtggacccaaagcagctagctgtgtatgaagagtttgcacggaatgtgcctgga
ttcttacctacaaatgacctaagtcagcctacagggtttttagctcagcctatgaagcaa
gcgtgggcaacagatgacgtagctcagatttatgataagtgtattacagaactggagcag
catctacatgccattccaccaactttggccatgaatcctcaagcacaggctctgagaagt
cttttggaggttgtagtcttgtctcggaattctcgggatgcgatagctgctcttggatta
ctgcagaaggctgtagagggcttattagatgctacaagtggtgctgatgctgacttactg
ctgcgatacagggaatgccatctgttggtcctgaaagctctgcaggatggcagggcatat
gggtctccatggtgcaataaacagatcacaaggtgcttaattgagtgtcgagatgagtat
aaatataatgtggaggctgtggagttgttaattcgaaatcatttggttaatatgcagcag
tatgatcttcatctagctcagtcaatggagaatggcttaaactacatggccgtggcattt
gctatgcaattggtaaaaatcctgcttgtggatgaaaggagtgttgcccatattactgag
gcagatctattccataccattgaaaccctcatgaggattaatgctcattccagaggcaat
gctccagaaggattgccccagctgatggaagtagtgagatccaactatgaagcaatgatt
gatcgtgctcatggaggcccgaactttatgatgcattctgggatctctcaagcctcagaa
tatgatgaccctccgggcctgagggagaaggcagagtatcttctgagggaatgggtgaat
ctataccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgttgga
caggtagagcttttggaaagaaagatgcaccaacaaggaatacttaagactgatgacctc
ataacaagattttttcgtctttgcactgaaatgtgtgttgaaatcagttaccgtgctcaa
gcggagcagcagcacaatcctgctgccaaccccaccatgatccgagccaagtgctaccac
aacctggatgcctttgtccgcctcattgcattgttagtgaagcactccggggaggccacc
aacactgtcacaaagatcaacctgctcaacaaggttcttggtatagtagtgggagttctc
ctacaagatcatgatgttcgacagagtgaatttcagcagcttccctaccacaggattttt
atcatgctgctgttggagctcaatgcacctgagcatgtgttggaaaccattaatttccag
actcttacagctttttgcaatacattccacatcttgaggcctaccaaggctcctggcttt
gtatatgcttggcttgagttgatctctcatcggatctttattgcaagaatgctggcacat
acgccgcagcagaaggggtggcctatgtatgcacagctgttgattgatttattcaagtat
ttagcgcctttccttagaaatgtggaactcactaaacctatgcaaatcctctacaagggt
actctgagagtgctgctagttcttttgcatgatttcccagagttcctttgtgattaccat
tatgggttctgtgatgtgatcccacctaattgtatccagttacgaaatttgatcctgagt
gccttcccaagaaatatgaggctcccagacccattcactcctaatctgaaggtggacatg
ttgagcgaaattaacattgcacctcggatcctcaccaatttcactggagtgatgccacct
cagttcaaaaaagatttggattcctatcttaaaacacgatccccggtcacttttctgtca
gatctgcgcagtaacctacaggtatccaatgagcctggcaatcgctacaacctccagctt
atcaacgcactggtgctctatgtagggactcaggccattgcacacatccacaacaagggc
agcacgccttcaatgagcaccattacccactcagcacacatggacatcttccagaatctg
gctgtggacctagatactgagggccggtatcttttcttaaatgcaatcgcaaaccagctg
cggtacccaaacagccacactcactacttcagctgcaccatgctgtacctgtttgccgag
gcaaacactgaggcaatccaggaacagatcacgagggttctcttggaacggttgattgta
aataggccacatccttggggtcttcttattaccttcattgagctgattaaaaacccagca
ttcaagttctggaaccatgaatttgtacactgtgccccagagattgaaaagttgttccag
tctgttgcacagtgctgcatgggacagaagcaggctcagcaagtgatggaagggaccggt
gccagttag
DBGET
integrated database retrieval system
