Meriones unguiculatus (Mongolian gerbil): 110551276
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Entry
110551276 CDS
T05884
Symbol
Prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110551276 (Prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mun03041
]
110551276 (Prpf40a)
Spliceosome [BR:
mun03041
]
Complex A
U1 snRNP components
U1 related factors
110551276 (Prpf40a)
Complex B
110551276 (Prpf40a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
CEP164_N
WW_2
Motif
Other DBs
NCBI-GeneID:
110551276
NCBI-ProteinID:
XP_060246153
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All DBs
Position
8:complement(93716297..93763660)
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AA seq
1036 aa
AA seq
DB search
MQAAPSEAEAGGESPRSCVSAARSDWTVGKPVSLLAPLVPPRSSGQPLPFGPGGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMESQPPSRGPGDGERRLSGSNLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMSGMMMSHMSQASMQPALPPGVNSMDVAAGAASGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGGLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTEIPTTMSTIAAAEAAAAVV
AAAAAAAAAANANASTTPTNTVGSVPVAPEPEVASIVAAAADNETTATVSAEEQAQLANT
AAIQELSGDMASNTGEEPSKQETVTDFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLK
EKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKE
SFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQ
LRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHI
RALEKEEEEEKQKTLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIR
FTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVA
IISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPI
ELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKH
HRKRSRSRSGSDSDDDDSHSKKKRQRSESHSASEHSSSAESERSYKKSKKHKKKSKKRRH
KSDSPESDTEREKDKKDKDRESEKDRSRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGE
LEKRRRTLLEQLDDDQ
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggcgccgagcgaggctgaggctgggggcgaatcgccgcggagctgcgtgtcg
gccgcgcgctctgattggacagtcgggaagcctgtcagtttattggccccgctggtcccg
ccccgcagctcagggcagcctttaccctttggccccggcgggcgtcagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccgacggagcagtctgagcccgacgatg
aggccggggactggagccgagcgcggaggcctcatggtgagtgaaatggagagccaacct
ccctcgcggggtcccggggacggggagcggagattgtccggctcaaacctgtgctccagt
tcttgggtttctgctgacggcttcctgaggagacggccctcgatggggcatcctggtatg
cattacgcaccaatgggaatgcaccctatgggtcagagagcaaacatgcctcctgtacct
catggaatgatgccacagatgatgcctcctatgggagggcctccaatgggacaaatgcct
gggatgatgtcttcagtaatgtccgggatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgcctggagtaaatagtatggatgtagcagcaggtgcagcatctggt
gcaaaatcaatgtggacagaacataaatcgcctgatggaaggacttattattataatact
gaaacaaaacagtctacctgggaaaagccagatgatcttaaaacacctgctgagcaactt
ttgtctaaatgcccatggaaggagtacaagtctgattctgggaagccttattactataat
tctcaaacaaaagagtctcgctgggctaaacctaaggaacttgaagatcttgaaggatac
cagaataccattgttgctggaggtcttattacaaaatcaaacctgcatgccatgatcaaa
gctgaagaaagcagcaagcaagaagaatgtactacaacatcaacagccccagttcccacc
acagaaattcctaccactatgagtaccatagctgctgcagaagcagcggctgctgttgtt
gcagctgctgcagcagctgctgcagctgctaatgccaatgcttccaccacacctactaat
actgtgggcagtgttccagttgctcctgaacctgaagttgcttccattgttgctgctgct
gcagataatgaaactacagcaactgtatcagctgaggagcaggcacagcttgctaatacc
gcagctattcaagaactgagtggtgatatggctagtaatactggagaggaaccatctaaa
caagaaactgtaaccgattttactcctaaaaaagaagaggaagagagccaaccagcaaaa
aaaacatatacttggaatacaaaggaggaggcaaagcaagcatttaaagaattactgaaa
gaaaagcgggtaccctccaatgcttcatgggaacaagctatgaaaatgatcattaatgat
cctcggtacagtgctttagcaaagctgagtgagaaaaagcaggcctttaatgcctataaa
gtccagacagagaaagaagaaaaagaagaagcaagatcaaaatacaaagaagctaaagaa
tcctttcagcgttttcttgaaaatcatgagaaaatgacttctacgactagatacaaaaaa
gctgagcaaatgtttggggagatggaagtttggaatgcaatatcagagcgtgatcgtctt
gaaatctatgaagatgttttattcttcctttcaaaaaaagaaaaggaacaagcaaagcag
ttaaggaagagaaattgggaagccttaaaaaacatacttgacaatatggctaatgttaca
tactccactacttggtctgaagcccagcagtatctgatggataatccaacatttgcagaa
gatgaagagttacagaatatggataaagaagatgcattaatatgctttgaggaacacatc
cgggctttagaaaaggaagaagaagaagaaaaacagaagactttgttgagagaaaggagg
cggcagcgtaaaaatagggaatcttttcagatatttttagatgaattgcatgagcatgga
caactacattctatgtcctcttggatggaattgtatccaactattagttctgacattaga
ttcactaatatgcttggtcagcctgttttttcattaggatcaactgcacttgatcttttc
aagttttatgttgaagatcttaaagcacgttatcatgatgaaaaaaagataataaaagac
attctgaaggataaaggatttgtagttgaagtaaacactactttcgaagattttgtggca
ataatcagttcaaccaaaagatcaactactttggatgctggaaatatcaagttggctttc
aatagtttactagaaaaggcagaggcccgtgaacgtgaaagagaaaaagaggaagctcgg
aaaatgaaacgaaaagagtctgcatttaagagtatgttgaaacaagctgctcctccaata
gaactggatgctgtctgggaagatatccgggaaagatttgtgaaagaaccagcatttgag
gacataactctagaatctgaaagaaaaagaatatttaaagattttatgcatgtacttgag
catgaatgtcagcatcatcattcaaagaacaagaaacattctaagaaatccaaaaagcac
cataggaaacgctctcgctctcgatcgggatcagattcagatgatgatgacagccattca
aagaaaaaaagacagcggtcagagtcccattctgcttcagaacattcttctagtgctgag
tctgaaagaagttacaagaaatcaaaaaagcataagaagaaaagcaaaaagaggagacat
aaatctgactctccagaatcagatactgaacgagagaaggataaaaaagataaagatcgg
gaaagtgaaaaagacagaagtagacagagatcagaatcaaaacacaaatcacctaagaaa
aagactggaaaggattctggtaactgggatacttctggcagtgaactgagtgaaggggaa
ttagaaaagcgcagaagaacccttttggagcaactggatgatgatcaataa
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