Meriones unguiculatus (Mongolian gerbil): 110551637
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Entry
110551637 CDS
T05884
Symbol
Sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110551637 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mun03041
]
110551637 (Sf3b1)
03036 Chromosome and associated proteins [BR:
mun03036
]
110551637 (Sf3b1)
Spliceosome [BR:
mun03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110551637 (Sf3b1)
Complex B
110551637 (Sf3b1)
Complex C
U2 SnRNP specific factors
110551637 (Sf3b1)
Chromosome and associated proteins [BR:
mun03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110551637 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
110551637
NCBI-ProteinID:
XP_021498014
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All DBs
Position
15:complement(43282911..43321857)
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AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagcccaaggagtgggccttgattccacaggttattatgac
caagaaatttatggtggaagtgatagcagatttgctggatacgtgacatcaattgctgcc
actgaacttgaagatgatgacgatgactactcttcatctacgagcttgcttggtcagaag
aagcctgggtaccatgcccctgtggcactccttaatgatattccacagtcaacagagcag
tatgatccatttgctgaacatcgccccccaaagattgcagatcgggaagatgaatacaaa
aagcataggcggaccatgataatttctccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgcaagaacttacatggatgttatgcgagaacagcat
ttgactaaggaagagagagaaattaggcaacaactagcagaaaaagctaaagctggagaa
ctaaaagtcgtcaatggagcagcagcatcccagcctccctcaaaacgaaaacggcgctgg
gatcaaactgctgaccagactcctggtgccactcccaaaaagttatcaagttgggatcag
gcagagacaccgggacataccccttctttaagatgggatgagacaccaggtcgtgcaaaa
ggaagtgaaactcctggagcaaccccaggctcaaagatatgggatcctacacctagtcac
acacctgctggagctgctactcctggtcgaggtgatacgccaggccatgcaaccccaggc
cacgggggtgcgacttccagtgctcgtaaaaacagatgggatgagactcccaaaacagaa
agagatactcctgggcatggaagcggatgggctgagactcctcgaacagatcgaggtgga
gactctattggtgaaacaccaactcctggagcaagtaaaagaaagtctcgttgggatgaa
acaccggctagtcaaatgggtggaagcactcctgttttgacaccaggaaaaacaccaatt
ggcacaccagctatgaatatggctacccccactccaggtcatataatgagcatgactcct
gaacagcttcaggcttggaggtgggagagggaaattgatgagcgaaaccgcccactttct
gatgaagagttagatgctatgttcccagaggggtacaaggtacttccccctccagctggt
tatgttcctattagaactccggctcgaaagctgacagcaactccgacacctttgggcggc
atgactggtttccacatgcagactgaagatagaactatgaaaagtgttaatgaccagcca
tctgggaaccttccatttttaaaacctgatgacattcagtactttgataaactgttggtt
gatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaagttg
cttttaaaaattaagaatggtacacctccaatgagaaaggctgccttacgtcagattact
gataaagctcgagaatttggagctggacctttgtttaaccagattcttccactgttgatg
tcgcctacacttgaggatcaagagcgacatttactcgtgaaagttattgatagaatattg
tataaacttgatgacttagtacgaccgtatgtgcacaagattcttgtggttatcgagcca
ctgttgattgatgaagattattatgctagagtggaaggccgagaaattatttccaattta
gcaaaggctgctggtctggccactatgatttctaccatgagacctgatatagataacatg
gatgaatatgtccgaaacacaacagctagagcttttgctgttgtagcctctgccctgggc
attccttctttattgcccttcttaaaagctgtgtgtaaaagcaaaaagtcttggcaagcg
aggcacactggtattaagattgtacaacagatagctattctcatgggctgtgctatcttg
ccacatctcagaagtttagttgaaatcattgaacatggtcttgtggatgagcagcagaaa
gttcgtaccatcagtgctttggccattgctgctttggctgaagcagcaactccttatggt
attgaatcttttgattctgtgctcaagcccctgtggaagggtatccgccaacacagagga
aagggtctggctgctttcttaaaggctattgggtatcttattccccttatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattcgagaattccagtctcct
gatgaagaaatgaagaaaattgttttgaaggtggtgaaacaatgttgtggaacagatggt
gtggaagcaaactacattaaaacagagattcttcctcctttctttaaacacttctggcaa
cacagaatggctttggacagaagaaattaccgacagttagttgatacgactgtagagttg
gcaaacaaagtaggtgcagcagaaattatatctaggattgtggatgacctgaaagatgaa
gctgaacagtacaggaaaatggtgatggaaacaattgagaaaattatgggcaacctaggt
gcagcagatattgatcacaaacttgaagaacaactgattgatggtattctttatgctttc
caagaacagactacagaggattcagtaatgttgaatggctttggcacagtagttaatgct
cttggcaaacgagtcaaaccgtacttgccccagatctgtggtacagttttatggcgttta
aataacaaatcagcaaaagttaggcagcaagcagccgacttgatttctcgaactgctgtt
gttatgaagacctgtcaagaggaaaaactgatggggcacttgggtgtggtgctgtatgaa
tacttgggtgaagagtaccctgaagtactgggtagcattcttggagcgctgaaagctatt
gtaaatgtaataggtatgcataagatgacaccaccaataaaagatctcctgcctagactc
actcctatcttaaagaacaggcatgaaaaagtacaagagaattgtatcgatcttgttgga
cgtattgctgacaggggcgctgaatatgtatctgcaagagagtggatgaggatttgcttt
gagcttttagagctcttaaaagctcacaaaaaagctattcgaagagctactgtcaacacg
tttggttatatcgcaaaggccattggccctcatgatgtactggctacgcttttaaacaac
ctcaaagttcaggaaaggcagaacagggtttgtacaactgtagcaatagccattgttgct
gaaacatgctcacccttcacagtactccctgccttaatgaatgaatacagagttcctgaa
cttaacgttcaaaatggagttttgaagtcactttccttcttgtttgagtatatcggtgaa
atgggaaaagactatatctatgctgtgacgcccttgcttgaggatgcattaatggatagg
gaccttgtgcacagacagacagctagtgcagtggtgcagcacatgtcacttggtgtgtat
gggtttggctgtgaagactccctgaatcacttactgaactatgtgtggcctaatgtgttt
gagacctctccccacgtgatccaggcagtcatgggagctctggaaggcctgagggttgcc
attggaccgtgcagaatgttgcagtattgcttacagggtctgtttcacccggctcggaaa
gtcagagatgtatattggaaaatttacaactccatctacattggctcacaggacgctctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaactt
gactatatcttgtaa
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