Meriones unguiculatus (Mongolian gerbil): 110551832
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Entry
110551832 CDS
T05884
Symbol
Lig3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110551832 (Lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mun03400
]
110551832 (Lig3)
Enzymes [BR:
mun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
110551832 (Lig3)
DNA repair and recombination proteins [BR:
mun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
110551832 (Lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Synaptonemal_3
Motif
Other DBs
NCBI-GeneID:
110551832
NCBI-ProteinID:
XP_021498328
LinkDB
All DBs
Position
7:complement(37553017..37576334)
Genome browser
AA seq
1012 aa
AA seq
DB search
MTLAFKILFPRNLCALGRKELCLFPEHNRWPAIRQLSQWSETDFLRGCCLLQRRKPVLPF
QGGHLRPRATHLVFFPGSHVGLCTGPYEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQ
HIADLSSKAAGTPKKKAAVQAKLTTTGQVTSPAKGASFVTSTNPRKFSGFSAAKPNNSEQ
APSSPAPRTSLSASKCDPKHKDCLLREFRKLCAMVAENPSYNIKTQIIQDFLQKGSTGDG
FHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDEMARDLEQGDVSETIRVFF
EQSKSFPPAAKSLLTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHKV
AHFKDYIPKAFPGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDVSLMDRPLCERRKFLHDNMVEVHNRIMFSEMKQVTKASDLADMINRVIREGLEGLV
LKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGHGSKGGMMSIFLMGCYDP
DSQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKK
AAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADF
AVVAGDEGNSTTGGSSGENGGSAVPRKGPKAPPSKSSASSKKTEQKPNNPNGRDGNKLIL
KPSPMKPGEKLAMKSSPVKVGVKRKATDDTPCPTKVLLNVFTGVQLYLPPSTPDFKRLKR
YFVAFDGDLVQEFDIASATHVLGARDKNTEAQLVSPEWIWACIRKRRLIAPC
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagatcctcttcccaagaaacctttgtgcccttggcagaaaagaa
ctgtgtctgttcccagaacacaatcgctggcctgctataagacagttgagccagtggtca
gaaacagatttccttcgtgggtgctgtctcctccagagaagaaagcctgttctacctttt
caaggaggtcatctaagaccacgtgccacccaccttgttttcttcccagggtcgcatgtg
ggactctgtactggcccctatgagatggcggagcagcggttctgtgtggactatgccaag
cggggcacagctggctgcaagaaatgcaaggagaagattgtaaagggtgtatgccgaatt
ggcaaagtggtgcccaatcccttctccgagtctgggggcgatatgaaggagtggtaccac
attaagtgcatgtttgagaaactggagcgggcacgggccaccacaaaaaaaatcgaagac
ctcacagagctggaaggctgggaagagctggaagacaatgaaaaggaacagataagccag
catattgcagatctatcctctaaggcagctggcacaccaaagaagaaagctgctgtccag
gctaagctgacaaccactggccaggtgacatcccctgcaaaaggtgcttcatttgttacc
agtaccaatccccggaaattttctggcttttcagcagccaaacccaacaactctgagcaa
gctccctcaagccctgcccctagaacaagtctgtcagcaagtaaatgtgaccctaaacac
aaagattgtctacttcgagagttccggaagttgtgcgccatggtagctgaaaatcctagc
tacaacataaagacccagatcatccaggacttcttgcagaaaggctccacaggagatggc
ttccacggcgacgtgtatctaacagtgaagctgttgctgccaggcgtcattaagagtgtc
tacaacttgaacgataagcaaattgtgaaactttttagccgcatttttaactgcaaccca
gatgagatggcccgggacctagaacagggtgacgtgtcagagacgatcagagtcttcttt
gagcagagcaagtcttttcccccagctgccaagagcctcctcaccatccaagaagtggat
gccttccttctgcacctctccaagctcaccaaagaggatgagcagcagcaggccctacag
gacattgcctccaggtgtacagccaatgaccttaagtgtatcatccggctcatcaaacat
gatctgaagatgaactcgggtgcaaaacatgtgttagatgcccttgaccccaatgcttat
gaagccttcaaagcgtcacgcaacctgcaggatgtggtagagcgggtccttcacaatgag
caggaggtggagaaggacccaggccggcgtcgggctctgagtgtccaagcctcattgatg
actcctgtgcagcccatgctggctgaggcctgcaagtccatcgagtatgcaatgaagaag
tgtcccaatggcatgttctctgagatcaagtacgatggtgagcgagtccaggtgcataag
aagggggaccacttcagctacttcagccgcagtctcaagcctgtcctgcctcacaaggtg
gctcactttaaggactacattcccaaggcctttcctgggggtcaaagcatgatcttggac
tccgaggtgctcctgattgacaacaacaccggcaaaccactgccctttgggactctggga
gtgcacaagaaagctgccttccaggatgctaatgtctgcctgtttgtttttgattgtatc
tactttaatgatgtcagtttgatggataggcctctttgtgagcgacggaagtttcttcat
gacaacatggtagaagtccataaccggatcatgttctcagaaatgaagcaagtcacaaaa
gcctcagacctggctgacatgataaaccgggtgatccgagagggcttagaagggctggtg
ctgaaggatgtaaagggtacatacgagcctgggaagcgacactggctgaaagttaaaaaa
gattatttgaacgagggggccatggctgatacagctgatctggtggttcttggggccttc
tatgggcacgggagcaaaggcggcatgatgtccatcttcctcatgggctgctatgaccct
gatagccagaagtggtgcaccgtcaccaaatgttccggcggtcatgatgatgccacactt
gcccgcctgcagaaggagctagatatggtgaagatcagcaaggatcctagcaagataccc
agttggctgaagatcaacaagatctactatcctgactttattgtcccagacccaaagaaa
gctgctgtgtgggagatcacaggggcagaattctctaaatctgaggctcacactgctgat
gggatctccatccgatttcctcgatgcacccgaatccgggacgacaaggactggaaatct
gctacgaacctcccccaactcaaggaactgtaccagctgtccaaagagaaggcagacttt
gctgtggtggctggagatgagggcaattccaccactggaggcagcagtggtgagaatggg
ggctctgctgtaccccgaaagggcccaaaagcacctcccagtaagtcctctgccagttcc
aagaagaccgaacagaagccaaataaccccaatggcagagatggcaacaagctgattcta
aagccttcccccatgaaaccaggagagaagctggccatgaagtcttctccagtgaaagtg
ggggtgaagaggaaagctactgatgacactccatgcccgacaaaggtgctgttgaatgtc
ttcactggggtgcagctctacttgccaccttccacaccagacttcaaacggctcaaacgc
tattttgtggcattcgacggggacctggtacaggaatttgacatcgcctcagccacacat
gtgctgggtgccagggacaagaacactgaggcccagttggtctccccagagtggatttgg
gcatgtatccggaaacggaggctaatagctccctgctag
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