Meriones unguiculatus (Mongolian gerbil): 110552356
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Entry
110552356 CDS
T05884
Symbol
Arid1a
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03082
ATP-dependent chromatin remodeling
mun04714
Thermogenesis
mun05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110552356 (Arid1a)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110552356 (Arid1a)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110552356 (Arid1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mun03000
]
110552356 (Arid1a)
03021 Transcription machinery [BR:
mun03021
]
110552356 (Arid1a)
03036 Chromosome and associated proteins [BR:
mun03036
]
110552356 (Arid1a)
Transcription factors [BR:
mun03000
]
Eukaryotic type
Helix-turn-helix
ARID
110552356 (Arid1a)
Transcription machinery [BR:
mun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110552356 (Arid1a)
Chromosome and associated proteins [BR:
mun03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110552356 (Arid1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
110552356
NCBI-ProteinID:
XP_021499275
LinkDB
All DBs
Position
3:18038190..18113727
Genome browser
AA seq
2287 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAERGEMKAAAGQESEGPA
VGPPQPLGKELQDGAESNGGGGAGGGGGGGPGAEPDLKNSNGNAGPRPALNNNLPEPPGG
GGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAA
LQSGGGGGLESYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPGSGA
PAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSS
ARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAAAASGGAQQRSHHAP
MSPGSSGGGGQPLARTPQSSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQP
YGSQTPQRYPMTMQGRAQSAMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQ
QPPYSQQPPSQTPHAQSSYQQQPQPQQPQLQSSQPPYSQQQAQPPHQQSPTPYPSQQSTT
QQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQPQQSQQTAYSQQRFPPPQ
ELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGV
STSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPA
GNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYTSPQPGSALSPRQPSGGQ
MHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPNAGMAGSMNPMGAGGQ
MHGQPGIPPYGTLPPGRMTHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQESAVA
MHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAG
MAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPER
KMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNL
NVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGS
MQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTFQ
KRNSMTPNPGYQPNMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPY
SRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSTPDSGMYS
PSRYPPQQQQQQQQPQRHDSYGNQFSTQGTPSSSPFPSQQTAMYQQQQQNYKRPMDGTYG
PPAKRHEGEMYSVPYSTGQGQPQQQQLPAAQSQSASQQQAAQPSPQQDVYNQYSNAYPAT
ATAATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMW
QGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPS
APVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGP
PVPASHIAPTPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKS
GLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGD
PGQRTLLDPGRFRKVSSPAPTEEEEEEELLEPKLEEEGEEEEVVDNDEEMAFLGKDKPPS
ENSEEKLVSKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTH
FESKIELLPSRPYVPCPTPPRKHLTTAEGATGTTEQEGPPPDGLPEKRITATMDDMLSTR
SSTLTDEGTKSAEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLA
KRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQD
QGVSCDKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAE
AQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDR
KNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHM
QNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDV
LFLIGQS
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagccgagcagcagcagcgggaggaggcggggggcgaggcggcggcg
gcggcggccgagcgcggggagatgaaggcggccgccgggcaggagagcgagggccccgcc
gtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaatgggggt
ggcggagccggcggcggcggcggcggcgggcccggcgcggagccggacctgaagaactcg
aacgggaacgcgggccctaggcccgccctgaacaataacctcccggagccgcccggcggc
ggcggcggcggtagcagcgacggggtgggggcgcctcctcactcggccgcggccgccctg
ccgcccccagcctacggcttcgggcagccctacggccggagcccgtccgccgtcgccgcc
gccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctggcagcg
ctgcagagcggcggcggcgggggcctggagtcctacgccgggccccagcagaactcgcac
gaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagcgcctacccc
ccgcccccccaggcctacgcgctgagctccccgagaggtggcactccgggctccggcgcg
ccggccgccggctccaagccgcctccctcctccagcgcctctgcctcctcgtcgtcttcg
tccttcgctcagcagcgcttcggggccatggggggaggcggcccctcagcggccggcggg
ggaactccccagcccaccgccacccccaccctcaaccaactgctcacgtcgcccagctcg
gcccggggctaccagggctaccccgggggcgactacggcggcgggccccaggacgggggc
gcgggcaagggcccggcggacatggcctcgcagtgctggggggctgcggcggcggcggcg
gcggcggcggcggcggcggccgcctcgggaggggcccaacaaaggagccaccacgcgccc
atgagccccgggagcagcggcggcggggggcagccgctcgcccggacccctcagtcatcc
agtccaatggatcagatgggaaagatgagacctcagccgtatggtgggactaacccatac
tcgcaacaacagggacctccttcaggaccgcagcaaggacatgggtacccagggcagcca
tatgggtcccagactccacagcggtacccaatgaccatgcagggccgggctcagagtgcc
atgggcggcctctcttatgcacagcagattccaccttatggacagcaaggccccagtgga
tatggtcagcagggccagactccatactacaaccagcaaagtcctcatccccagcagcag
cagccaccttattcccagcagcctccatcccagacccctcatgcccagtcttcatatcag
cagcagccgcagccccagcagccacagcttcagtcctctcagcctccgtactcccagcag
caggcccagcctccacatcagcagtcccccactccatacccctcccagcagtccaccaca
cagcagcaccctcaaagccagcccccctactcacaaccacaggcacagtctccctaccag
cagcagcaacctcagcagccagcatcctcgacgctctcccagcaggctgcatatcctcag
ccccagcctcagcagtcccagcaaactgcctattcccagcagcgcttccctccaccacag
gagctttctcaagattcttttgggtctcaggcatcctcagccccctcaatgacctctagt
aaaggagggcaggaagatatgaacctgagtcttcagtcaagaccctccagcttgcctgat
ctctctggttcaatagatgatctccccatggggacagaaggagctctgagtcctggcgtg
agcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttt
tctcctcatacctcccctcacctgcctggcatccgaggcccgtccccatcccctgttggc
tctcctgccagtgtcgctcagtctcgctcaggaccactctcgcctgctgcagtgccagca
ggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcatccttcc
atgaaccaatcaagcattgcccaagatcgaggttatatgcagaggaacccccagatgccc
cagtacacttcccctcagcccggctcagccttatctccacgtcagccttctggaggacag
atgcatacaggcatgggctcctaccagcagaactctatggggagctatggcccccagggg
agtcagtatggcccacaaggaggctaccctaggcagcctaactataatgccttgcccaat
gccaactaccccaatgcaggcatggctggaagtatgaaccctatgggtgctggaggtcaa
atgcacgggcagcctggaatcccaccttatggcacactccctccagggaggatgactcat
gcgtctatgggcaacaggccttatggacctaatatggccaatatgccacctcaggttggg
tcagggatgtgtcctccaccaggcgggatgaaccggaaaactcaagaatctgctgttgcc
atgcatgttgctgccaactctatccaaaacaggccaccaggctacccaaatatgaatcaa
gggggcatgatgggaactggacctccctatggacaggggattaatagtatggctggtatg
atcaaccctcagggacccccatatcctatgggtggaaccatggccaacaattcagcaggg
atggcagccagcccagagatgatgggccttggagatgttaagttaactccagccacaaaa
atgaacaacaaagcagatgggacacccaagacagaatccaaatctaagaaatccagctct
tccactacaactaatgagaagatcaccaagttgtatgagctgggtggtgagcccgagagg
aagatgtgggtggaccggtacttggccttcacagaggaaaaggctatgggcatgacaaat
ctgcctgctgtgggcaggaagcctctggacctctaccgcctctatgtgtctgtgaaggag
attggtgggctgactcaggtcaacaagaacaaaaagtggcgggaacttgcgaccaacctc
aatgtgggtacatcaagcagtgcagccagctctttgaaaaagcagtatatccagtgtctc
tatgcctttgaatgcaagattgagcggggcgaagaccctcctccagacatctttgcagct
gctgactccaagaagtcccagcccaagatccagcctccttctcctgcgggatcaggatct
atgcagggtccacagactcctcagtcaaccagcagctcgatggcagaaggaggagacctg
aagccaccaactccagcatccacaccacatagtcaaattccccccttaccaggcatgagc
aggagcaactcagttggaatccaggatgcctttcctgatggaagtgaccccacattccag
aagcggaattccatgactccaaaccctgggtaccagcccaatatgaatacctctgacatg
atggggcgcatgtcctatgagccaaataaggatccttatggcagcatgaggaaagctcca
ggaagtgatcccttcatgtcctcagggcagggccccaacggcgggatgggtgacccctac
agccgtgctgctggccctgggctgggaaatgtggctatgggaccacgacagcactatccc
tatggaggtccttatgacagagtgaggacggagcctggaatcgggcctgaaggaaatatg
ggcactggagcccctcagccaaatctcatgccttccaccccagactcggggatgtattct
cctagccgctaccctccccagcagcagcaacagcaacagcagccgcagcgacatgattcc
tatggcaatcagttctctacccaaggcaccccttccagcagccccttccccagccagcag
accgcaatgtatcagcagcagcagcagaattataagaggccgatggatggcacatacggc
cctcctgccaagcggcacgaaggggagatgtacagtgtgccgtacagcactgggcagggg
cagccccaacagcagcagttgcctgccgctcagtctcagtctgccagccagcagcaagct
gctcagccttcccctcagcaagatgtgtacaaccagtacagcaatgcctatcctgctact
gccaccgctgctactgagcgccgaccagcaggcggcccccagaaccaatttccattccag
tttggccgagaccgggtctctgcacctcctggttccaatgcccagcagaacatgccacca
caaatgatgggcggccccatacaggcatcagctgaggttgctcagcaaggcaccatgtgg
caggggcgaaatgacatgacctacaattatgccaacaggcagagcacaggctctgccccc
cagggtcctgcgtatcatggtgtgaaccgaacagatgagatgctccacacagatcagagg
gccaaccatgaaggcccatggccttcccatggcacacgccagcctccatatggtccttca
gcccctgtaccccccatgacaagaccccctccgtctaactaccagcccccaccaagcatg
cagaatcacattcctcaggtatccagccccgcgcccctccctcggcccatggagaaccgt
acttctcctagcaagtctccattcctgcactcggggatgaaaatgcagaaggcaggtccg
ccggtacctgcttcgcacatagcacctacccctgtgcagccccccatgattcgacgggat
attacctttccacctggctctgttgaagccacacagcctgtgttgaagcagagaagacgg
ctcacaatgaaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtct
gggctcctggcagagagcacatgggcgttagacaccattaacatcctcctatatgatgac
aacagcattatgaccttcaacctcagtcagctcccagggttgctagagctccttgtggaa
tatttccgtcgatgcctgattgagatctttggcattttaaaggagtatgaggtaggggac
ccgggacagagaacactgctagaccctgggagattccgcaaggtgtctagtccagccccc
acagaggaggaagaggaggaagaactcctagagcctaaactggaggaggagggggaggag
gaagaagtggttgataatgatgaggagatggcctttttgggcaaggacaagccaccttca
gagaatagtgaggagaagctagtcagtaaatttgacaagcttccagtaaagatcgtgcag
aagaacgacccttttgtggtggactgctcggataagcttgggcgtgtgcaggagttcgac
agtggcctgctgcactggcggattggtggaggggataccactgagcatatccagacccac
tttgagagcaagatcgagctgctgccttcccggccttatgtgccctgcccaacgcctcct
cggaaacacctcacgacagcggagggtgcaacagggacaacggagcaagagggccccccg
cctgatggccttccagaaaaaaggatcacagccaccatggatgacatgttgtccacccgg
tctagcacattgactgacgagggaacaaagagtgcagaggccaccaaggaaagcagcaag
tttccatttggcattagcccagcccagagccaccggaacatcaagattttagaggatgag
ccccacagtaaagacgagaccccactgtgtacccttctggattggcaggattccctcgct
aagcgctgtgtctgtgtctccaataccatccggagcctgtcgtttgtgccaggcaacgac
tttgagatgtccaaacatccagggctgctgctcatcctgggcaagctgatcctactgcat
cataagcacccagaacggaagcaggcaccactgacttatgagaaggaggaggaacaggac
caaggggtgagctgtgacaaagtggagtggtggtgggactgcttggagatgctccgggaa
aacacactggtcacccttgccaacatctcggggcagttggacctatccccgtaccctgag
agcatctgcctgcctgtcctggacggactcctacactgggcagtttgcccttcagctgaa
gcccaggaccccttctccaccttaggccccaatgccgtcctctctccccagagattggtc
ttggaaaccctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccaca
cccccctttagccgcctggagaagttatatagtaccatggtgcgcttcctcagtgaccga
aagaacccagtgtgccgggagatggccgtggtactgctggccaatctggcacagggggac
agcctggcagcccgggccattgcagtgcagaagggcagcatcggcaacctcctgggcttc
ctggaggacagccttgctgccacacaattccagcagagccaggccagcctcctccatatg
cagaacccaccctttgaaccaactagtgtggacatgatgcggcgggctgcccgagcactg
cttgccctggccaaggtggacgagaaccactcagaattcactctgtatgagtcacggctg
ttggacatctccgtatcaccattgatgaactcattggtttcacaagtcatttgtgatgta
ctgtttttgattggccagtcatga
DBGET
integrated database retrieval system
