Meriones unguiculatus (Mongolian gerbil): 110552401
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Entry
110552401 CDS
T05884
Symbol
Htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun05016
Huntington disease
mun05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110552401 (Htt)
05022 Pathways of neurodegeneration - multiple diseases
110552401 (Htt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110552401 (Htt)
04131 Membrane trafficking [BR:
mun04131
]
110552401 (Htt)
03029 Mitochondrial biogenesis [BR:
mun03029
]
110552401 (Htt)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110552401 (Htt)
Membrane trafficking [BR:
mun04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110552401 (Htt)
Mitochondrial biogenesis [BR:
mun03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
110552401 (Htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
110552401
NCBI-ProteinID:
XP_021499342
LinkDB
All DBs
Position
12:complement(29544305..29681312)
Genome browser
AA seq
3120 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQPQPPPPPPAPPQPPQPPPQGQQPPHAPPPPPLPG
PAEEPLHRPKKELSATKKDRVSHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDA
ESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRP
QKCRPYLVNLLPCLTRTSKRPEESVQETLAVAVPKIMASFGNFANDNEIKVLLKAFIANL
KSSSPTVRRTAASSAVSICQHSRRTQYFYSWLLNVLLGLLVPMEEEHPTLLILGVLLTLR
CLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYELTLHHTQHQDHNVVTGALEL
LQQLFRTPPPELLQALTTPGGLGQLTLVQEEARGRGRSGSIVELLAGGGSSCSPVLSRKQ
KGKVLLGEEEGLEDDSESRSDVSSSAFAASVKSEIGGELAASSGVSTPGSVGHDIITEQP
RSQHTLQADSVDLSSCDLTSAATDGDEEDILSHSSSQFSAVPSDPAMDLNDGTQASSPIS
DSSQTTTEGPDSAVTPSDSSEIVLDGADSQYLGMQIGQPQEEEEAAGVLSGEVSAVFRNS
SLALQQAHLLERVGHSRQPSDSSIDKFVSRDEVADAGDPESKPCRIKGDIGHPNDDDSAP
LVHCVRLLSASFLLTGEKKALVPDRDVRVSVKALALSCIGAAVALHPESFFSKLYKVPLD
TMESSEEQYVSDILNYIHHGDPQVRGATAILCGTLLCSILSRSRLRVGDWLGTIRTMTGN
TFSLVDCIPLLQKTLKDESSVTCKLACTAVRYCLPSLCSSSYSDLGLQLLIEMLPLKNSS
YWLVRTELLETLAEIDFRLVSFLEAKAESLHRGAHHYTGFLKLQERVLNNVVIYLLGDED
PRVRHVAAASLTRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHETQPPSHFSVSTI
TRIYRGYSLLPSITDVTMENNLSRVVAAVSHELITSTTRALTFGCCEALCLLSAAFPVCT
WSLGWHCGVPPLSASDESRKSCTVGMASMILTLLSSAWFPLDLSAHQDALILAGNLLAAS
APKSLRSSWTSEEEANSAATRQEEAWPALGDRTLVPMVEQLFSHLLKVVNICAHVLDDVT
PGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQTSVPMSPKKGGETSTASRQSETSGPVT
ASKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRSALDVLSQILEL
ATLQDIGKCVEEVLGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQFDGLSSNPSKSQC
RAQRLGSSSMRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDASGWFDVLQKVSAQ
LKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQLVQLRV
NYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKI
IQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQ
YHQVLEMFILVLQQCHKENEDKWKRLSRQVADIILPMLAKQQMHIDSHEALGVLNTLFEI
LAPSSLRPVDMLLRSMFITPSTMASVSTVQLWISGILAILRVLISQSTEDIVLSRVQELS
FSPYLISCPVINRLRDGDSNSTLGERSEGKQIKNLPEDTFSRFLLQLVGILLEDIVTKQL
KVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFTSDGCEGSFYTLESLNA
RVRSMVPTHPALVLLWCQILLLINYTDHRWWAEVQQTPKRHSLSCTKSLNPQISGEEEDS
GSAAQLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLISLSHEPPVQDFI
SAIHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSGAVLTLYVDRLLGTP
FRALARMVDTLACRRVEMLLAANLQSSMAQLPVEELNRIQEHLQNSGLAQRHQRLYSLLD
RFRLSTVQDSPSPLPPVTSHPLDGDGHTSLETVSPDKDWYLQLVRSQCWTRSDSALLEGA
ELVNRIPADDMNDFMMSSEFNLSLLAPCLSLGMSEIAAGQKSPLFEAARGVTLDRVISVV
QQLPAVHQVFQPFLPIEPTAYWSKLNDLLGDATSYQSLTILARALAQYLVVISKVPAHLH
LPPEKEGDTVKFVVMTLEALSWHLIHEQIPLSLDLQAGLDCCCLALQVPGLWAVLSSPEY
VTHACSLIHCVRFILEAIAVQPGDQLLGPESRSNTPRAIRKEEVDSDTQNPSYITSACEM
VAEMVESLQSVLALGHKRNSTLPSFLTPVLKNIVISLARLPLVNSYTRVPPLVWKLGWSP
KPGGDFGTVFPEIPVEFLQEKEILKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPLVM
EQEESPPEEDTERTQIHVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKALDTR
FGRKLSMIRGIVEQEIQEMVSQRENTATHHSHQAWDPVPSLLPATTGALISHDKLLLQIN
SERELGNMSYKLGQVSIHSVWLGNNITPLREEEWDEEEEEEVDVPAPTSPPLSPVNSRKH
RAGVDIHSCSQFLLELYSRWILPSSAARRTPVILISEVVRSLLVVSDLFTERTQFEMMYL
TLTELRRVHPSEDEILIQYLVPATCKAAAVLGMDKTVAEPVSRLLESTLRSSHLPSQIGA
LHGILYVLECDLLDDTAKQLIPVVSDYLLSNLKGIAYCVNIHSQQHVLVMCATAFYLMEN
YPLDVGPEFSASVIQMCGVMLSGSEESTPSIIYHCALRGLERLLLSEQLSRLDTESLVKL
SVDRVNVQSPHRAMAALGLMLTCMYTGKEKASPSRASDPSPATPDSESVIVAMERVSVLF
DRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQT
LHSAGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFLASASTSPWVSAILPHVISRMGK
LEQVDVNLFCLVATDFYRHQIEEEFDRRAFQSVFEVVAAPGSPYHRLLACLRNVHKVTTC
NT seq
9363 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctggaaaagctgatgaaggctttcgagtcgctcaagtcattccagcagcag
cagcaacagcagcagcagccgcagccgccgccaccaccgccggcaccgcctcagccccct
cagccgccgcctcaggggcagcagccgccgcatgcgccgccgccaccgccgctgccgggt
ccggcggaggagccgctgcaccgaccaaagaaggaactctcagccaccaaaaaggaccgt
gtgagccattgtctaacaatatgtgaaaacatcgtggcccagtctctcagaaattctcca
gaatttcagaaactcttgggcattgctatggagctgtttctgctgtgcagtgacgatgcg
gagtcagatgtcagaatggtagctgatgagtgcctcaacaaagtcatcaaagctttgatg
gattctaatctcccaaggctacagttagaactctataaggaaattaaaaagaatggtgct
cctcgaagtttgcgcgcagccctatggagatttgccgagctggctcacctggttcgacct
caaaagtgcaggccttacctagtgaaccttctgccatgcctgacccgaacaagcaagaga
cctgaggaatcagttcaggagactttggctgtagctgttcccaaaattatggcttctttt
ggcaattttgcaaatgacaatgaaattaaggttctgttgaaagctttcatagcaaatctg
aagtcaagctctcctactgtccgacggacagcagccagctcagcagtgagcatctgccag
cactccaggaggacacagtacttctacagttggctcctaaatgtgctcctaggtctgctg
gttcccatggaggaagaacatcccactctcctgatcctcggtgtgttgctcacattgagg
tgtttagtgcccttgctccagcagcaggtcaaggacacaagtctaaaaggcagctttggg
gtgacacggaaagaaatggaagtctctccttctgcagagcagcttgtccaggtttatgaa
ctgactttgcatcacacacagcaccaagaccacaatgtggtaacaggggcactggagctc
ttgcaacagctatttcgtactcctccacctgagctgctgcaagcattgactacaccaggt
ggtcttgggcagctcactttggttcaagaggaggcccggggccgaggccgcagtgggagc
attgtggaacttttagctggagggggttcctcatgcagccctgttctctcaagaaagcaa
aaaggtaaagtgctgttaggagaagaagaaggcttggaagatgactcggaatccaggtca
gatgtcagcagctcagcctttgcagcctctgtgaagagtgagattggtggagagcttgct
gcttcttcgggtgtttccactcctggttctgtaggtcacgacatcattactgaacagcct
cggtcccagcacacacttcaagcagattctgtggatttgtccagctgtgacttgaccagt
gctgctactgatggggatgaggaggacatcttgagccacagttccagccagtttagtgct
gttccatctgaccctgccatggacctgaatgatgggacccaggcctcctcacccatcagc
gacagttctcagaccaccactgaagggcctgattcagctgtgactccttctgacagttct
gaaattgtgttagatggtgccgacagccagtatttgggcatgcagataggtcagccacag
gaggaggaggaggctgcaggtgttctttctggtgaagtctctgctgttttcagaaactct
tctctggctcttcaacaggcacacttattggaaagagtgggtcatagcaggcaaccttct
gacagcagtatagataagtttgtatcaagagatgaggttgctgacgccggtgacccagaa
agcaagccttgccgaatcaaaggtgatataggacatcctaatgatgatgattctgctcct
ctggtccattgtgtccgtcttttatctgcttcctttttgttaactggggaaaagaaagca
ctggttccagatagggatgtgagggtcagtgttaaggccctggccctcagctgtattggt
gcagctgtggcccttcatccagaatccttcttcagcaaactgtataaagtacctcttgac
accatggaaagttctgaggaacagtatgtctctgacatcttgaactacatccatcacgga
gacccacaggtccgaggagctactgccattctctgtgggactcttctctgctccatcctc
agcaggtcccgcctccgtgttggtgactggctgggcaccatcagaacaatgacaggaaat
acattttctctggtggactgcattcctttgctgcagaaaaccttgaaggatgaatcttct
gttacttgcaagttggcttgtacagctgtgaggtactgcctcccgagtctttgcagcagc
agctacagtgacttgggattacaactgctcatcgaaatgctgcctctgaagaacagttcc
tactggctggtgaggactgagctgctcgaaactcttgcagagattgacttcaggctggtg
agttttttggaggcaaaagcagaaagtttacaccgaggggctcatcattatacagggttt
ttaaaactacaagaacgagtgctcaataatgtggtcatttatttgcttggagatgaagac
cccagggtgcgacatgttgccgcagcatcgttgacaaggcttgtcccaaagctgttctat
aaatgtgaccaaggacaggctgatccagtagtggctgtagcaagagatcaaagcagtgtt
tacctgaaactcctcatgcatgagacccagccaccgtcgcacttctctgtcagcaccata
accagaatctatagaggctacagcttactgccaagtataacagatgttacgatggaaaac
aacctttcaagagttgttgctgcagtttctcatgaactcattacgtcaactacacgggca
ctcacatttggatgttgtgaagccttgtgtcttctttcagcagcctttccagtttgcact
tggagtctaggatggcattgtggagtgcccccactgagtgcctctgatgagtccaggaag
agctgcactgtggggatggcctccatgattctcaccttactttcatcagcttggttccca
ttggacctctcagcccatcaggatgccttgattttggctggaaacttgcttgcagctagt
gcccccaagtctctgagaagttcatggacttctgaagaagaagccaactcagcagccacg
agacaggaggaagcctggcctgctctgggggatcggaccctggtgcccatggtggagcag
ctgttctcccacctgctgaaggtggtcaatatctgcgctcatgtcttggatgatgtgact
cctggaccagcaattaaggcagctttgccttctctaacaaaccccccttctctaagtcct
attcgacggaaagggaaggagaaagaaccaggagaacaaacatctgttccaatgagtccc
aagaaaggtggtgagaccagtacagcctctcgacaatcagagacctcaggacctgtcaca
gcaagtaaatcttcctccctggggagtttctaccatcttccttcctacctcaaactgcat
gatgtcctgaaagccactcacgccaactataaggtcaccttagatcttcagaacagcact
gaaaagtttgggggattcctgcgctctgccttggatgtcctctctcagattctagagctg
gcgacactgcaggacattggaaagtgtgttgaagaggtccttggatacctgaaatcctgc
tttagtagagaaccaatgatggcaactgtctgtgttcaacagctattgaagactctcttt
gggacaaacttggcctcacagtttgatggcttatcttccaaccccagcaagtctcaatgc
cgagcacagcgtcttggctcttccagcatgaggccaggcttatatcactactgcttcatg
gcaccatatacgcacttcacacaggccttggctgatgccagcctgaggaatatggtgcag
gccgagcaggagcatgatgcctcagggtggtttgatgtactccagaaagtgtctgcccaa
ttgaagacgaacctcacaagtgtcacaaagaaccgtgcagataagaatgctattcacaat
cacattagattatttgaacctctcgttataaaagcattgaagcagtacaccacaacgaca
tctgtgcagttgcagaagcaggttttggatttgctggcacagctggttcagttacgggtc
aattactgtctactggattcagatcaggtattcatcggttttgtgctgaagcagtttgag
tacattgaagtgggccagttcagggaatcagaggcaattattccaaatatatttttcttc
ctggtattactgtcttatgaacgctatcattcgaaacagatcattggaattcctaaaatc
atccagctgtgtgatggcatcatggccagtggaaggaaggctgtaacacatgccatacct
gctctgcagcccattgtccatgacctctttgtgttaagaggaacaaataaagctgacgca
gggaaagagcttgaaacccagaaggaggtggtggtgtccatgttgttaaggctcatccag
taccatcaggttctggagatgttcatccttgtcctgcagcagtgccacaaggagaatgag
gacaagtggaaacggctatctcggcaggtcgcagacatcatcctgcccatgttagccaag
cagcagatgcatattgactctcacgaagcccttggagtgttaaataccttgtttgagatt
ttggctccttcctctcttcgtcctgtggacatgcttctgcggagtatgttcatcactcca
agcacaatggcatctgtaagcactgtgcagctgtggatatctggaatcctagccattctg
agggttctcatttcccagtccaccgaagacattgttctttctcgtgttcaggagctctcc
ttctctccatatttaatctcctgtccagtaattaataggttaagggatggagacagtaat
tcaacactgggagaacgcagtgaagggaaacaaataaagaatttgccagaagacacattc
tcaagatttcttttacagctggttggtattcttttagaagacattgttacaaaacagctc
aaagtggaaatgagtgaacagcagcatacattctactgtcaagagctaggcacactgctc
atgtgtctgatccacattttcaaatctggaatgttccggagaatcacagcagctgccact
agactcttcaccagtgatggctgtgaaggcagcttctatactttagagagcctgaatgca
cgggtgcgatccatggtgcccacacacccagccctggtactgctctggtgtcagatccta
ctgctaatcaactacactgaccaccgatggtgggcagaggtgcagcagacacccaagaga
cacagtctgtcctgcacgaagtcacttaacccccagatatctggtgaagaagaggattct
ggctcagcagctcagcttggaatgtgcaatagagaaatagttcgaagaggggcccttatt
ctcttctgtgattatgtttgtcagaatctccatgactcagaacacttaacgtggctcatt
gtgaatcatattcaagatctgatcagcctgtcccatgagcctccagtacaagactttatt
agtgctattcatcgtaattctgcagctagtggtctttttatccaggcaattcagtctcgt
tgtgaaaatctctcaactccaaccactctgaagaaaacacttcagtgcttggaaggcatc
catctcagccagtctggtgctgtgctcacgttatatgtggacaggctcctgggcactccc
ttccgggcgctggctcgcatggttgacaccctggcctgtcgccgggtagaaatgcttttg
gctgcaaatttacagagcagcatggcccagttgccagtggaggaactgaacagaatccag
gagcacctccagaacagtgggcttgcacaaagacaccaaagactctattccctgctggac
aggttccgactctctactgtgcaggactcacctagccccttgcccccagtcacttcccac
ccactggatggggatgggcacacatctctggaaacagtgagtccagacaaagactggtac
ctccagcttgtcagatctcagtgttggaccagatcagattctgcactgctggaaggtgca
gagctggtgaatcgcatccctgctgatgacatgaatgacttcatgatgagctcggagttc
aacctgagccttttggctccctgcttaagccttggcatgagtgagattgctgctggccag
aagagtcctctttttgaagcagcccgtggggtgactctggatcgagtgatcagtgttgtt
cagcagcttcctgctgtccatcaagttttccagcctttcctgcctatagagcccacagcc
tactggagcaagttgaatgatctgcttggtgatgccacatcataccagtctctgaccata
cttgcccgtgccctggcacagtacctggtggtgatctccaaagtgcctgctcatttgcac
cttcctcctgaaaaggagggagacacagtgaagtttgtggtaatgacacttgaggcccta
tcatggcatttgatccatgagcagatcccactaagtctggaccttcaagctgggctggac
tgctgctgcctagcactacaggtgcctggcctctgggcggtgctgtcgtccccagagtat
gtgacccatgcctgctccctcatccattgtgtgagattcatcctggaagccattgcagta
cagcctggagaccagcttcttggtccagaaagcaggtcaaatactccaagggctatcaga
aaggaagaagtagactcagacacacaaaatcctagttacatcacttcagcctgtgagatg
gtggcagaaatggtggagtccctgcagtcagtcctggccttgggtcataagaggaatagc
actctgccttcatttctcacaccagtgctaaagaacattgtcatcagcctggcccgtctc
cccctagtcaacagctatacacgtgtgcctcctctggtctggaaacttggttggtcaccc
aagcctggaggggattttggcacagtgttccctgagatccctgtagagttcctccaggag
aaggagatcctcaaggagttcatctaccgcatcaacactctagggtggaccagtcgtacc
cagtttgaagaaacttgggccaccctccttggtgtcctggtgactcagccccttgtgatg
gaacaggaagagagcccaccagaggaagacacagaaagaacccagatccatgtcctggct
gtgcaggccatcacctctctagtgctcagtgcaatgactgtgcctgtggctggcaatcca
gctgtaagctgcttggaacaacagccccggaacaagcccctgaaggctctcgataccaga
tttggaagaaagttgagcatgatcagagggattgtagaacaagagatccaagaaatggtt
tcccagagagagaatactgccactcaccattctcaccaggcatgggatcctgtcccttct
ctgttgccagctactacaggtgccctcatcagccatgacaagctactgctgcagatcaac
tcagaacgggagctaggcaacatgagctacaagctgggccaggtgtccatacactctgtg
tggctggggaacaacatcactccgttgagagaggaggaatgggatgaagaagaggaggaa
gaggttgatgtccctgcacctacatcaccacctttgtctccagttaattccagaaaacac
cgtgctggggttgatattcactcctgttcgcagtttctgcttgaattgtacagccgctgg
atcctgccatccagtgcagccagaaggactcccgtcatcctgatcagtgaagtggttcga
tctcttcttgtggtgtcagacttattcactgaacgtacccagtttgaaatgatgtacctg
acactgacagaacttcggagagtgcacccttcagaagatgaaatcctcattcagtacctg
gtgcctgccacctgcaaggcagctgctgtccttggaatggacaaaactgtggcagagcca
gtcagccgcctactggagagcacactcaggagcagccacctgcccagccagattggagcc
ctacatggcattctctacgtgttggagtgtgacctcttggatgacactgcaaagcagctc
attccagtcgttagtgactatctgctgtccaacctcaaaggaatagcctactgcgtaaac
attcacagccagcagcacgtgctggtgatgtgtgccactgcattctacctgatggaaaac
tacccgctggatgtgggaccagagttttcagcatctgtgatacagatgtgtggagtaatg
ctgtctggaagtgaggagtccaccccctccatcatttaccactgtgccctccggggtctg
gaacgtctcctgctgtctgagcagctctctcggctagacacagaatccttggtcaaacta
agtgtggacagagtgaatgtacaaagcccacaccgggccatggcagctctaggcctaatg
ctcacctgtatgtacacaggaaaggaaaaggccagtcccagccgagcctctgaccccagc
cctgctacacctgacagtgagtctgtgatcgtggctatggaacgggtgtctgttctcttt
gataggatccgcaagggatttccctgtgaagccagggtcgtggcaaggatcctgcctcag
ttcctagacgacttcttcccaccacaagatgtcatgaacaaagtcattggagagtttctg
tccaaccagcagccatacccgcagttcatggccactgtagtatacaaggtttttcagact
ctgcacagtgctgggcagtcatccatggtccgggactgggtcatgctgtccctgtccaac
ttcacacaaagaactccagttgccatggccatgtggagcctctcctgcttccttgccagt
gcatctaccagcccgtgggtgtcagcgatccttccacatgttatcagcaggatggggaaa
ctggagcaggtggatgtgaaccttttctgcctggttgccacagacttctacagacaccag
atagaggaggaattcgaccgcagggctttccagtctgtgtttgaagtggtggcggcacca
ggaagtccataccaccggctgcttgcttgtttgagaaatgttcacaaggtcaccacttgc
tga
DBGET
integrated database retrieval system
