Meriones unguiculatus (Mongolian gerbil): 110554757
Help
Entry
110554757 CDS
T05884
Symbol
Vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04140
Autophagy - animal
mun04148
Efferocytosis
mun05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110554757 (Vps39)
04148 Efferocytosis
110554757 (Vps39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110554757 (Vps39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mun04131
]
110554757 (Vps39)
Membrane trafficking [BR:
mun04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
110554757 (Vps39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
KCTD11_21_C
EcoR124_C
DUF4145
Motif
Other DBs
NCBI-GeneID:
110554757
NCBI-ProteinID:
XP_060228147
LinkDB
All DBs
Position
18:21459671..21505080
Genome browser
AA seq
886 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPADVASPESGSCN
RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF
TCDLQHTESGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG
FKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCA
LNWTDIPVAMEHQPPYIVAVLPRYVEIRTLEPRLLVQSIELQRPRFITSGGSNIIYVASN
HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQK
RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPTLSGAELEKAHLALIDYL
TQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL
RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV
QYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLSFLIENFKGLA
VPYLEHIIHVWEETGSRFHNCLIQLYCEKVQSLMKDYLLSLPTGKNPVPAGEETGELGEY
RQKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAK
EYCHKHYDQNKDGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPQANLQAALQVLELHYS
KLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQ
QVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNSADT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccggtgccaatcctggaaaagcttcccctgcagatcgactgc
ctggctgcctgggaggaatggcttcttgttggaaccaaacaagggcatcttcttctctac
aggattaggaaggatgtagtgcctgcagatgtagcctcacctgaaagcggcagttgtaac
aggtttgaagtaacactagaaaagtccaataagaacttttccaaaaagatccagcagatc
cacgtcgtttcccagtttaagattctagtcagcttgttagaaaacaacatttatgtccat
gacttactgacatttcaacaaatcactacagtttcgaaggccaagggagcatcacttttc
acctgtgacctccagcacactgagtcgggtgaggaggtgttgcggatgtgtgtggcggtg
agaaagaagctgcagctgtacttctggaaggacagggaattccacgagctgcagggggac
tttagtgtacctgatgtgcccaagtccatggcgtggtgtgaaaattctatctgtgttggt
ttcaagagagactactacctgatcagggtggatggaaaggggtccatcaaagagctcttc
cccacaggaaagcagcttgagcccttagttgctcctctggcagatggaaaagtagccgtg
ggccaggatgatctcactgtggtgctcaatgaggaaggcatctgcactcagaagtgtgcc
ttgaactggacagacatcccagtggctatggagcaccagcctccatacatcgtcgcagtg
ttgccccgatatgtggagatccgaacactggaaccgaggcttctggttcagagcattgag
ttgcagaggccccgcttcattacctcagggggatcaaacattatctatgtggccagcaat
cacttcgtctggagactcattcctgtccccatggcaacccaaatccagcagcttctccag
gacaagcagtttgaactggctctgcagcttgcggaaatgaaggatgactcagacagcgaa
aagcagcagcaaatccatcacatcaagaacttgtatgccttcaacctcttctgccagaag
cgctttgatgagtccatgcaggtctttgctaagcttggcacagatcccacccacgtgatg
ggtttgtacccggacctactgcccacagactacaggaagcagctgcagtaccctaacccg
ctgcccacactctctggtgctgaactggagaaggctcacttagctctcattgactacctg
acgcagaaacgaagccagctggtgaagaagctgaatgactcggatcaccagtccagcacc
tccccgctcatggaaggcactcccaccatcaagtccaagaagaagttacttcagatcatc
gacaccaccctgctgaagtgctacctccacactaacgtggccctggtggctcccttgctg
cgcctggagaacaaccactgtcacattgaggagagtgagcatgtgctgaagaaggcacac
aagtacagtgagctgatcatcctgtatgagaagaaggggctccatgagaaagctctgcag
gtgctagtggaccagtccaagaaagcaaattcacctctgaaaggccatgagcggacagtg
cagtatctgcagcacttgggcacagaaaacctccatttgattttttcctactctgtctgg
gtcctgagagactttccagaagatggcctgaagatattcacggaagacctcccggaggtg
gagtctctgccacgagatcgggtgctcagcttcttaatagagaattttaagggtctggct
gttccttatctggagcacatcatccacgtgtgggaggagacaggctcgcgattccacaac
tgcctgatccagctgtactgtgagaaagtgcagagtctgatgaaagactatctcctgtcc
ctgcccacaggcaagaatccagtccctgctggggaggaaacaggcgagctgggagaatac
cgacaaaagctgcttatgttcttggagatttccagctactatgatccaggccggctcatc
tgtgattttccctttgatggcctcttagaagaaagagctctcctgttggggcgtatgggg
aagcacgaacaagctctcttcatctatgtccacatcttgaaggacacaaagatggccaag
gagtactgccacaaacactacgaccaaaacaaagacggcaacaaagatgtgtacctgtcc
ctgcttcggatgtacctgtcgccccccagcattcactgcctggggccaatcaaactggag
ctactggagccacaggccaacctccaggctgcgctgcaggtcctagagctgcactacagc
aagttagataccaccaaggcgatcaaccttctgccagcaaacactcagatcaatgacata
cgcatctttctagaaaaggtcttagaagaaaatgcacaaaagaaacggttcaaccaggtg
ctcaagaaccttctccatgccgagttcctccgggttcaggaagagcggattttacaccag
caagtgaagtgcatcatcactgaggaaaaggtgtgcatggtgtgcaagaagaagatcggc
aacagtgcgttcgcaagataccccaatggagtggtcgtgcactacttctgttccaaagag
gtaaactcagccgacacctga
DBGET
integrated database retrieval system
