Meriones unguiculatus (Mongolian gerbil): 110555037
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Entry
110555037 CDS
T05884
Symbol
Col3a1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04611
Platelet activation
mun04820
Cytoskeleton in muscle cells
mun04926
Relaxin signaling pathway
mun04933
AGE-RAGE signaling pathway in diabetic complications
mun04974
Protein digestion and absorption
mun05146
Amoebiasis
mun05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110555037 (Col3a1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
110555037 (Col3a1)
09152 Endocrine system
04926 Relaxin signaling pathway
110555037 (Col3a1)
09154 Digestive system
04974 Protein digestion and absorption
110555037 (Col3a1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
110555037 (Col3a1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
110555037 (Col3a1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
110555037 (Col3a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mun00536
]
110555037 (Col3a1)
Glycosaminoglycan binding proteins [BR:
mun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110555037 (Col3a1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
110555037
NCBI-ProteinID:
XP_021503689
LinkDB
All DBs
Position
15:34984081..35020581
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AA seq
1463 aa
AA seq
DB search
MMSFVRSGTWCLLTLLHPALILAQQSNIDELGCNYLGQSYESRDVWKPEPCQICVCDSGS
VLCDDIICDDEPLDCPNPEIPFGECCAICPQPSTPAPVPPNGQGPQGPKGDPGPPGIPGR
NGDPGLPGQPGLPGPPGAPGICESCPTGGTNYSPQFDSYDVKSGVGGMGGYPGPAGPPGP
PGPPGSSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRPGE
RGLPGPPGIKGPAGMPGFPGMKGHRGFDGRNGEKGDTGAPGLKGENGLPGENGAPGPMGP
RGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGS
NGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGT
NGAPGTRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGT
AGERGAPGFRGPAGPNGIPGEKGPAGERGGPGPAGPRGVAGEPGRDGAPGSPGIRGATGS
PGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGG
PGLPGPAGKNGETGPQGPPGPTGPSGDKGDAGPPGPQGLQGIPGTSGPPGENGKPGEPGP
KGEAGAPGAPGGKGDAGAPGERGPPGAAGTSGPRGATGPPGPEGGKGPAGPQGPPGSSGS
PGLQGMPGERGGPGSPGPKGEKGEPGGTGADGSPGKDGPRGPAGPIGPPGPAGQPGEKGE
GGAPGLPGVAGLRGGPGERGEPGPPGPAGFPGAPGQNGEPGGKGERGAPGERGEGGPPGI
AGPPGGSGPAGPPGPPGGKGERGSPGGPGAAGFPGGRGLPGPPGNNGNPGPPGPSGAPGK
DGPPGPAGNSGSPGSPGIAGPKGDAGQPGEKGPPGAQGPPGAPGPLGIAGLTGARGLAGP
PGMPGPRGSPGPQGIKGESGKPGASGHNGERGPPGPQGLPGQPGTAGEPGRDGNPGSDGQ
PGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSGAPGPAGA
RGAPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGPPGSPGAAGHQGAVGSPGPAGPRGP
VGPHGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGAPGPPGPPGAPGPCCGGGA
AIAGVGGEKSAGFAPYYGDEPMDFRINTEEIMSSLKSVNGQIESLISPDGSRKNPARNCR
DLKFCHPELKSGEYWVDPNQGCKMDAIKVFCNMETGETCINASPMTVPQKNWWTDSGAEK
KHVWFGESMNGGFQFSYGNPDLPEDILDVQLAFLRLLSSRASQNITYHCKNSIAYMDQAT
GNVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAMRLPIID
IAPYDIGGPDQEFGVDVGPVCFL
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcgaagtgggacctggtgtcttctcactctgcttcatcccgccctt
attttggcacaacagtctaacatagatgaattgggatgcaactaccttggtcagtcctat
gagtccagggatgtctggaagccagaaccatgccaaatatgtgtctgtgactcaggatct
gtcctctgtgatgacataatatgtgatgacgagccactagactgccccaacccagagatc
ccattcggagaatgttgtgcaatatgcccacagccttcaactcctgctcctgtacctcct
aatggtcaaggacctcaaggccccaagggagatccaggccctcctggcattcctgggaga
aatggcgaccctggcctgccaggccaaccaggtctcccaggtcctcctggagcccccgga
atctgtgaatcatgtccaactggtgggacgaactattctccccagtttgactcctatgat
gtcaagtcgggagtaggaggaatgggtggctatcctgggccagctggtcccccaggcccc
ccaggtcctcctggctcttctggacatcctggttctcctggttctcccgggtaccaaggt
ccacctggtgagcctggccaagctggtcctgcaggccctccaggaccccctggtgctatt
ggtccatctggtcctgctggaaaggatggagagtcagggagacctggacgacctggagag
cgtggactgcctggacctccaggtatcaaaggcccagctggcatgcctggattccctggt
atgaaaggtcacaggggctttgatggccgaaatggagaaaagggcgatacaggtgctcct
ggactgaagggtgaaaatggtcttcctggagaaaatggagctcctggccctatgggtccc
agaggggctcctggtgagcgaggacggccaggccttcccggagccgctggtgctcgaggc
aatgatggtgctcggggcagtgatggccaaccaggtcctcccggtcctcctggaactgca
ggattccctggatcccctggtgctaagggtgaagttggacctgcaggttcccctggctca
aatggctctccaggacaaagaggggaacctggaccgcagggacatgctggtgctcaaggg
cctcctggccctcccgggaataacggcagtcctggcggtaaaggtgaaatgggtccagct
ggcattcctggtgcccccggactaatgggagccagaggaccccctggaccagctggcact
aacggtgcacccggaacgcgaggtccttcaggtgaacccggcaagaatggtgcaaaggga
gagccaggtgcccgcggtgaacggggggaagctggttccccaggaattccaggacctaag
ggtgaagatggcaaagatggatcacctggagaacctggtgcaaatggacttccaggaact
gccggagaaaggggtgctcctggcttccgagggcctgcaggaccaaatggcatcccagga
gaaaagggtcctgctggagagcgtggtggaccaggtcctgcagggcccagaggggtggct
ggagaaccaggcagagatggagccccaggaagtcccggaataaggggtgctactggaagc
ccaggaggaccaggcaatgatgggaaaccaggacctcccggaagtcaaggagaaagtggt
cgccctggtcctcctggcccatctggcccccggggtcaacctggtgtcatgggtttccct
ggtcctaaaggaaatgatggtgcgcctggcaagaatggtgaaaggggtggtcctggagga
cctggccttccaggccctgctggaaagaacggtgaaactggacctcagggtcccccaggc
ccaactggcccatctggtgacaagggagatgctgggccccccggtccacaaggattacag
ggcatacctggtaccagtggtcctccaggagaaaatggaaaaccgggagaaccaggtcca
aagggtgaagccggtgcacctggagctccggggggcaagggtgatgctggcgcacccgga
gaacgaggacccccgggagctgcagggacctctggtcctagaggagcaactggaccccct
ggccctgagggaggaaagggccctgctggtccccaaggtcctcccggttcttctggttct
cctggtctgcaagggatgccaggggagagaggaggtcctgggagtcctggtccaaagggt
gaaaagggtgaaccagggggtacgggtgctgacggatctcctggaaaggatgggccaagg
ggccctgctggtcctattgggccccctggcccagctgggcagcctggagaaaagggtgaa
ggtggtgcccctggacttccgggtgtggctggactccgaggtggtcctggtgaaagaggt
gaaccggggcctccaggacctgccggcttcccaggtgctcctggacagaacggtgaacca
gggggtaaaggagaaagaggcgccccaggagagagaggtgaaggaggccctcccggaatc
gcaggaccccctggaggctctggacctgcgggtcctcctggtcctccaggtggcaagggt
gaacgtggcagtcctggtggtcctggtgctgctggctttcccggtggacgcggtcttcct
ggtcctcctggcaacaatggtaacccaggccccccagggcctagcggtgctcccggcaag
gatggccctccaggtcctgcaggtaacagtggttctcctggcagccctggaatagctgga
ccaaaaggtgatgctggccagcctggagagaagggaccacctggtgctcagggccctcca
ggagccccaggcccacttgggattgcagggcttaccggagcacgaggtcttgctggacca
ccaggcatgccaggtcctaggggtagccctgggcctcaaggtatcaagggtgaaagtgga
aaaccaggagccagtggccacaatggggaacgcggtcctcctggaccccaaggtcttcct
ggtcagcctggcactgctggtgaacccggaagggatggaaaccctggatcagatggtcag
ccaggtcgtgatggatctcctggtggcaagggtgatcgtggtgaaaatggttctcctggt
gccccaggcgctcctggtcatccaggcccacctggtcctgttggtccagctggaaaaagt
ggtgacagaggagaaacggggcccgctggtccttccggtgctccaggtcctgctggagct
cggggtgctcctggtccccaaggtccacgaggtgacaaaggtgaaactggtgagcgtggt
tctaatggtatcaaaggacaccgaggattccctggcaatccaggccccccaggttctcct
ggtgctgctggtcaccagggtgcagttggtagtcctggacctgcaggtcccaggggacca
gttggaccacatgggcctcctggaaaagatgggacaagtggacatccgggtcctattggg
ccaccaggacctcgaggcaacagaggtgaaagaggatctgagggctctccaggccaccct
ggagcaccagggcccccaggaccccctggtgcacctggtccctgctgcggtgggggtgct
gccattgctggagtcggaggtgaaaagtctgctgggtttgcaccatattatggagatgaa
ccgatggatttcaggatcaacaccgaggagattatgtcttcactcaaatctgttaacgga
caaatagagagtctcatcagtcctgatggttctcggaaaaaccctgctcggaactgcaga
gacctgaaattctgccaccctgaactcaagagtggagaatattgggttgatcctaaccaa
ggttgcaaaatggatgctatcaaagtattctgtaacatggaaactggggaaacatgcata
aatgccagtcctatgactgttccacagaagaactggtggacagattctggggccgaaaag
aagcatgtttggtttggagaatctatgaatggtggttttcagttcagctatggcaatcct
gatcttcctgaagatatcctagatgtacagctggcatttctcaggcttctctctagccgg
gcctcccagaacattacataccactgcaagaacagcattgcctacatggatcaggccact
ggcaatgtaaagaaggccctgaagctgatgggatcgaatgaaggggaattcaaggctgaa
ggaaacagcaaattcacttacaccgttctggaggatggctgcactaaacacactggggaa
tggagcaaaacagtctttgaatatcgaacacgcaaggccatgagactacccatcatagat
attgctccttatgacattggtggtcctgatcaagaattcggtgtggatgttggccctgtt
tgctttttgtaa
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integrated database retrieval system
