Meriones unguiculatus (Mongolian gerbil): 110555136
Help
Entry
110555136 CDS
T05884
Symbol
Polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03020
RNA polymerase
mun03420
Nucleotide excision repair
mun05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110555136 (Polr2a)
09124 Replication and repair
03420 Nucleotide excision repair
110555136 (Polr2a)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110555136 (Polr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mun03021
]
110555136 (Polr2a)
03400 DNA repair and recombination proteins [BR:
mun03400
]
110555136 (Polr2a)
Enzymes [BR:
mun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110555136 (Polr2a)
Transcription machinery [BR:
mun03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110555136 (Polr2a)
DNA repair and recombination proteins [BR:
mun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110555136 (Polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110555136
NCBI-ProteinID:
XP_021503860
LinkDB
All DBs
Position
11:2364824..2390729
Genome browser
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggcggccccccctccggggacagcgcatgcccgctgcgcaccatcaagagg
gtgcagttcggagtcctgagtccggatgagctgaagcggatgtctgtgacagagggtggt
atcaaatacccagagacaacagagggcggccgccccaagcttgggggactaatggatcca
aggcagggggtgattgagcggactggccgctgccaaacgtgtgcagggaacatgactgag
tgtcctggccacttcgggcacattgagctggccaagcccgtgttccacgtgggcttcctg
gtgaagacaatgaaggtgttgcgctgcgtctgcttcttctgctccaagctgctcgtagac
tctaacaacccaaagattaaggatatcctggccaaatctaagggacagcccaagaaacgg
cttacacacgtctacgacctttgcaagggcaaaaacatctgtgaaggtggagaggagatg
gacaacaagtttggtgtggaacagcctgagggtgatgaggacctcaccaaagagaagggc
catgggggctgtgggcggtaccagccccgaatccggcgctctggcctagagttgtatgcg
gaatggaaacatgttaacgaggactcccaggagaagaagatcttgctgagcccagaacgc
gtgcatgaaatcttcaaacgcatctcggatgaggagtgctttgtgctgggaatggagccg
cgctatgcccggcctgagtggatgattgtcacagtgttgccggtgcctcctctgtccgtg
cgacctgcagttgtgatgcagggttctgcccgaaaccaggatgacctgactcacaaattg
gcagacatcgtgaagatcaacaatcagcttcggcggaatgagcagaatggtgccgctgcc
catgtcattgcagaggatgtgaagctcctccagttccacgtggccaccatggtggacaat
gagctacccggcttaccccgtgccatgcagaagtctggccgtcccctcaagtccctgaag
caacggctgaagggcaaggaaggacgggttcgagggaatctaatgggcaagagagtggac
ttctcagcccgtactgtcatcacccctgaccctaacctgtccattgaccaagttggggtg
ccccgctccattgctgccaacatgacctttgcagagattgtcactcccttcaacattgac
agacttcaggaattagtgcgcaggggaaacagccagtatccaggggccaagtacatcatc
cgtgacaatggtgatcggattgacttgcgtttccaccctaagcccagtgacctgcaccta
cagactggctacaaggtggaacggcacatgtgtgatggggacatcgtcatcttcaatcgt
cagccaactttgcacaaaatgtccatgatggggcatcgggtccgcatcctcccctggtct
actttccgcttgaatcttagtgtgacaactccatacaatgcagactttgatggggatgag
atgaatttgcacctgccacagtctctggagacccgggcagagatccaagagttggccatg
gtgcctcgaatgattgtcaccccccagagcaatcgacctgtcatggggattgtgcaagac
acactcacagcagtgcgcaaattcactaagagagatgtcttcctggagcggggcgaagtg
atgaacctcctaatgtttctgtccacgtgggacgggaaggtcccgcagccggctatcctt
aagccccggcccctgtggacaggcaagcagattttctccctcatcatccctggacacatc
aattgtattcgtacccacagcacccatcctgatgatgaagatagtggcccttacaagcac
atctctcctggggacaccaaagtggtggtggagaacggcgagctgatcatgggcatcctc
tgtaagaagtccctgggcacctcggcgggctctctggtccacatctcctacctagagatg
ggccatgacatcacccgcctcttctactccaacattcagacagtcattaacaactggctt
ctcatcgagggtcataccattggcattggggactccattgctgattccaagacttaccag
gacattcagaacaccattaagaaggctaagcaggatgtaatagaggtcattgagaaggct
cataacaatgaactagaacccaccccaggaaacacattgcgccagacattcgagaatcag
gtgaatcgtattctcaatgatgctcgagacaaaactggctcctctgcccagaaatccctg
tctgaatacaacaacttcaagtctatggtggtgtctggagccaaaggctccaagatcaac
atctcccaggtcattgctgttgtcgggcagcagaacgtggagggcaaacggatcccattt
ggatttaagcatcggactcttcctcactttatcaaggatgattatggtcctgagagtcga
ggctttgtagaaaactcgtacttagctggcctcacacccaccgagttcttctttcatgcc
atgggaggacgtgagggtctcatcgacacggccgtgaagactgccgagactgggtacatt
caacgaaggttgataaagtccatggagtcggtgatggtgaaatacgatgcaactgtgcgg
aactccatcaaccaggtggtgcagctgcgctatggagaggacgggctggcgggcgagagc
gtggagttccagaacctggctacgctgaaaccgtctaacaaagcttttgagaagaagttc
cgatttgattataccaatgagagggccctacggcgcactctgcaggaggatctggtcaag
gatgtgctgagcaatgcccacatccagaacgagctggagcgggagtttgagcggatgcgt
gaggaccgggaagtgctcagggtcatcttcccaactggggacagcaaggtggtcctcccc
tgtaacctcctgcggatgatctggaatgctcagaaaatcttccatatcaaccctcgcctt
ccctctgacctgcaccccatcaaagtggtagagggagtcaaggaattgagcaagaagttg
gtaattgtgaacggggatgacccgctaagtcggcaggcacaggagaatgccacactgctc
ttcaacatccacctgcgatccacactctgctcgcgccgcatggctgaggagtttcggctc
agtggagaggcctttgactggctgcttggggagatagagtccaagttcaatcaagccatt
gcccatcctggagaaatggtgggagctctggctgcacagtctcttggagaacctgccaca
cagatgacgctgaacactttccactatgccggtgtgtctgccaagaacgtgacactgggt
gtgcctcgactgaaggagctcatcaacatttccaagaagccgaagaccccctcactcact
gtcttcctcttaggccagtctgctcgagatgctgagcgggccaaggacattctgtgccgc
ttggaacatacaacactgaggaaggtcactgccaacactgcaatctactatgaccccaac
ccccagagcacagtggtggcagaagatcaggagtgggtgaatgtgtactatgagatgcct
gacttcgatgtggcccgaatatctccctggctgctgcgtgtggagctggaccgaaaacac
atgactgaccggaagctcaccatggaacagattgctgaaaagatcaatgcgggctttggc
gatgatctgaactgcatcttcaatgatgataacgcagagaagctggtccttcgcatccgc
attatgaacagtgatgagaacaagatgcaggaggaggaggaggtggtggataagatggat
gacgatgtgttcctgcgctgcattgagtccaacatgctgacagacatgaccctgcagggc
atcgagcagatcagcaaggtgtacatgcacttgcctcagacagacaacaagaagaagatc
atcatcacagaggacggcgagttcaaggccctgcaggagtggatcttggagacggacggt
gtgagcctgatgcgggtgctgagcgagaaggatgtggaccccgtgcgcaccacgtccaat
gacattgtggagatcttcacggtgctgggtattgaggctgtgcggaaggccctggagcgg
gagctgtaccacgtcatctccttcgacggctcctatgtcaactaccggcacttggccctc
ctgtgtgacaccatgacatgccgaggccatttgatggccatcactcgtcatggagtcaac
cgccaggacactggccccctcatgaagtgctcttttgaggagacggtggacgtcctcatg
gaggcagctgctcatggggagagtgaccccatgaagggggtctctgagaatatcatgctg
gggcagctcgctccagctggcactggctgttttgacctcctgcttgacgctgagaagtgc
aaatatggcatggagatccccaccaatatccctggcctgggagctgctggacccactggc
atgttctttggctctgcacccagtccaatgggaggaatatctcctgcaatgacaccctgg
aaccaaggagcaaccccagcctatggcgcctggtcccccagtgtcgggagtgggatgacc
ccaggagccgccggcttctctcccagtgctgcgtctgacgccagtggcttcagcccgggc
tactccccagcatggtcccctacaccgggctctccaggctcccctggaccctcaagcccc
tacatcccgtcaccaggcggcgctatgtctcccagctactcccccacatcacctgcttac
gagccacgctcccctgggggctatacgccccagagcccctcctactcccctacatcaccc
tcctactccccaacctctccatcttactctccaaccagtcccaactatagccctacctca
cccagctactccccaacctcccccagctactccccaacctcccccagctactccccgacc
tcgccatcttactcgccaacctcccccagctactccccaacttctcccagctactccccg
acatcgcccagctactccccgacctcgcccagctactcccccacctcccccagctactcc
cccacctcccccagctactcccccacctcccccagctactcgcccacctcccccagctac
tccccgacgtctcccagctattctccgacgtctccaagctactccccgacgtctccaagc
tactcccccaccagccctaactattcccccactagtcccaactacacaccaacgtcaccc
agctacagccccacgtcacccagctactcacccactagtccaaactacacgccgaccagc
cccaactacagccccacctctcccagctactccccgacttcacccagctacagccccacc
tctcccagctactccccctccagcccacggtatacgccccagtctccaacctacacaccg
agctcaccaagctacagccccagctcgccgagctacagccccacttcacccaagtacacc
ccaactagtccctcctacagtcccagctcaccggagtacaccccgacctctcccaagtac
tcgcccaccagccctaaatactcacctacttctcccaagtactctcccaccagccccact
tactcacccaccacccccaagtactcgcccacctcacccacctactccccgacctcgcca
gtgtacaccccgacctcccccaagtactcgcccaccagccccacctattcgcccacctct
cccaagtactctcccactagccccacatactcgcccacctcccccaagggctccacctac
tcgcccacctctcctggctactcgcccacctcccccacctacagcctcaccagccctgcc
atcagccctgacgacagtgatgaggagaactga
DBGET
integrated database retrieval system
