Meriones unguiculatus (Mongolian gerbil): 110555215
Help
Entry
110555215 CDS
T05884
Symbol
Tarbp1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mun03016
]
110555215 (Tarbp1)
03036 Chromosome and associated proteins [BR:
mun03036
]
110555215 (Tarbp1)
Enzymes [BR:
mun01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
110555215 (Tarbp1)
Transfer RNA biogenesis [BR:
mun03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110555215 (Tarbp1)
Chromosome and associated proteins [BR:
mun03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110555215 (Tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
110555215
NCBI-ProteinID:
XP_021503995
LinkDB
All DBs
Position
10:2432895..2474606
Genome browser
AA seq
1576 aa
AA seq
DB search
MERVLADALLAQSPEPRALLGALCGGEASAERAESLRLVLQRLEERGTGAQAAREVAEGH
LVPLLRAPPAGGSAGPRVLRAVGAALRSCARLAGPELATALAAQALRELPGAPAVELLAA
VAPCLRAPEDAPLLGRVARAAVELALAGDAPEAVGARLLPALAQSAEPAPREAWAALGAA
GPGAEGRAGPELLVLSALAERLLPERARRADPDARLRGRFWRTVQAGLGCARDALTRKRA
RYLLQKAVQGSAELAEDCTCGPRDTNDPSLFWWSAKKKDELLKFWENYILIMEVLEGNQI
HVIKPVLPKLNSLFESAVSEEHGCWLLHPSWHVCVYKRMFESENKTLTKEGVTHFLELYE
VKPLPCSPELSEFVTGPLMDALSESCLYSRSPGQLSGSGPPLGLKLQKFLATYISLLPEE
TKSCFLLKFIQRMADRHWCAVPILFLSRALASLPRCKALGREGLLALRDVLQCTMITHQV
LLRGAAQCYLLQAAMHLVDVEKVSLSEVSTFLTSLREEESLARGTVLWTELCDWLHVNER
HFRSPSGSAEGYEASLNAYVKTLVKEFVKPPGWEKESSFMPDWLDARLTALMVLLAVDVE
GMKTQFSEKQRTQNVLRIFLDPLLDTLGRLGTSAYMPVSRADSCLQLLVRLLHSCVPRGP
GAQDDEVSAALQASVMSAAESVSGFLLRRLTMDELHSVADLDRCQLYLAVLAELTGLQVK
LGWKAGNPISRLISPLRNACVHRLQEAEGGQEPTLGHQVQRVASMATLAALCEAEDQLVV
LQTRPPDAEPVDSFLSALPLSQMLQKPRSEEPSSGACQLENGRVFEESSSSQGWGKIVTQ
YLHDQWVCLSFLLRKRHLLTPAAGGGLLECSLPATERPSQTLRSALDVLMVLPVGRIVPV
FRCMEVLVPKLLTSEEPLCVESFDVAWKIVSSLSNTQLTFWPNLKAFVHFVFDNEILTIA
AKLRGQAYFKIKEIMCKLIEMSSIKTGVFNALMCHCCQSWVAAASGGCRGSFSSAKDYSE
LVLEACVFGTVFRRDQRLIQDVQTFIENLGQDCAANVVIENTKREDYCVRICAVKFLCLL
DGSDRAHKLFLEDLAIQLLAKDESASKSKTRYHENSLQHRVKNRVWQTLLVLFPRFDQNF
LNRIIDKIFHAGFINNQASIKYFIEWIIVLILHKFPQFLPKFWACFSSGEEKLKTSICTF
LSVLSHLDTIIQNVPEKTLVLKQALTVALQWCLSHNFSVRLYALVALKKVWCLCKALQFE
ECDAWSTLTECSLSQAESMHGAGNARKNWQRIQDHFFFSGFHPLKDYCLETIFYTLPRLS
GVTEEEWIAVDKFASFTDIPSRAGAPRYWSKTALSKLSPGDWSQQDQGSALGEEDSQPEW
ADVQKKIIPWGHSTLESDLELVSQDRAAKLGKSISRLIVVASLIDKPTNLGGLCRTCEVF
GAALLVVANLQCVSDRQFQHLSVSAEQWLPLVEVRPSQLMAYLQQKKAEGYTVIGVEQTA
QSCDLAQYCFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGITRSLNVHVSGALLIWE
YTRQRLRLLGGAEPPS
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtgctggcggacgcgctgctggcgcagagcccggagccccgcgcgctgctg
ggcgcgctgtgcggcggggaggcgagcgccgagcgggcggagagcctgcgcctggtgctg
cagcggctggaggagcgcggcacgggcgcccaggcggcccgcgaggtggccgagggccac
ctggtgcccctgctgcgcgcgccgccggctggagggtccgcggggccccgcgtgctgcgg
gcggtgggcgcggcgctgcgctcgtgcgcgcgcctggcgggccccgagctggcgacggcg
ctggccgcccaggccctgcgcgagctgccgggcgctccggccgtggagctgctggccgcc
gtggcgccgtgcctgcgcgctccggaggatgcgccgctgctgggccgcgtggcgcgcgcc
gcggtggagctggcgctggccggggacgcgcccgaggcggtgggcgcgcgcctgctgccc
gcgctggcccagagcgccgagccggcgccgcgggaggcgtgggccgcgctgggcgccgcg
gggccgggagccgagggccgcgcggggccggagctgctggtgctcagcgccctggccgag
aggctgctgcccgagcgcgcgcgccgcgccgaccccgacgcccgcctccgcggccgcttc
tggaggaccgtccaggccgggctgggctgcgcgcgggacgcgctcacccgcaagcgcgcg
cgctacctgctgcagaaggctgtgcaggggtcagcggagctggcggaggactgcacctgc
ggcccccgggacacgaacgatccaagcctattctggtggtctgcgaagaaaaaagatgag
cttctaaagttttgggaaaactatatcttgatcatggaagttcttgaaggaaaccagata
catgtcataaagccagtcttaccaaagctaaacagtctgtttgaatctgcagtctcagag
gaacatggctgctggctcctccatccctcctggcacgtgtgcgtttacaaaagaatgttc
gaaagcgagaataaaaccctgaccaaagaaggtgtgacccacttcctggagctgtacgag
gtgaagccactcccgtgctccccggagctgtccgagtttgttactggcccgctgatggat
gccctctcagagagctgtctgtacagcaggtccccagggcagctgtcgggaagcggccct
cctctgggattgaagctgcagaagtttctagccacttacatttctcttcttccggaggag
acaaagagctgcttcctgttgaagttcattcagaggatggcagacagacactggtgtgct
gtgcccattttgttcctctccagggcgctggccagcttgcccagatgtaaggccctgggc
agagaagggctcctcgccctcagggacgttctgcagtgcaccatgatcacacaccaggtc
ctgctgagaggcgcagcgcagtgctatcttcttcaggcggccatgcatctggtggacgtg
gagaaagtgtctctctctgaggtctccacttttctcacgtccctgagggaagaggaatcc
ttggcacgcgggaccgtgttgtggacagagctctgtgactggctccatgtcaacgagaga
cacttcaggtccccgagtggcagcgctgagggatacgaggcctcgctgaatgcctacgtg
aagaccctcgttaaggagttcgtgaagcctcccggctgggaaaaagagagcagcttcatg
ccagactggctggacgcgaggctgacggccctaatggtcctgctggctgtggacgtggaa
gggatgaaaacccagttcagtgaaaagcagaggacacagaacgtgctgaggatcttccta
gaccccctgctggacaccctggggaggctgggcaccagtgcctatatgcccgtgtccagg
gctgacagctgtctccagctgctggtgaggttgctgcattcctgtgtgccaagaggtccc
ggtgcccaggatgatgaggtgtccgctgccctgcaggcctccgtcatgtctgctgcagag
agcgtgtctgggttcctgctcaggagactcaccatggacgagctccacagcgtggcagat
ctggaccgttgccagctgtacctggcggtgttggcggagctcacgggtctccaggtgaag
ctgggctggaaagcaggcaaccccatcagccgcctcatttcccctttgagaaacgcgtgc
gttcaccgtctgcaggaggccgagggcggacaggagccaaccctgggtcatcaggtgcag
agagtggccagcatggccaccctggcagctctgtgtgaggctgaggaccagcttgtggtg
ctgcagactcgtcctcccgacgccgagcctgtggacagcttcctgtcagctcttccactc
agtcagatgctgcagaagccccgttcagaggagccgagcagtggagcgtgccagctggag
aacggcagggtgtttgaagaatcctcatcttcccaaggatggggaaaaatagtcacacag
tatctccacgaccagtgggtctgcctgtccttcctgctgagaaagcgccacctccttacg
ccagctgcaggaggtggcttgctggagtgctctctgcccgccactgagaggccctcacag
accctgcggtcggcgctggacgtgctcatggtcctccccgtgggccgcatcgtgccggtg
ttccgctgcatggaggtgctggttcccaagctcctgacctccgaggagccgctctgcgta
gaatcttttgacgtggcttggaaaatcgtatcttccctgagcaacactcagctgacattc
tggcctaatttaaaagcttttgttcactttgtttttgataatgaaattcttaccattgct
gcaaaactcaggggtcaggcatacttcaaaataaaagagattatgtgcaagctaattgaa
atgtcctccataaaaacaggggtcttcaatgctctgatgtgtcactgctgccagtcttgg
gtagcagctgcctccggagggtgccggggctccttctccagtgctaaggattacagcgaa
cttgtcctggaggcctgtgtgtttggaacagtgtttaggcgcgatcagagacttattcag
gatgtccaaaccttcatagaaaaccttggacaagactgtgcggccaacgtcgtcatagag
aacactaagagagaagattattgtgtgaggatctgtgctgtcaagttcttgtgtctgctg
gatggctccgacagagcccacaagctgtttttagaagatcttgccatccagctcttggct
aaggatgagtcggcatccaagtccaaaactcgctaccatgagaactccctacagcaccgg
gtgaagaaccgagtgtggcagacgctgctcgtcctgttccccaggtttgatcagaacttc
ttgaataggatcattgacaagattttccatgctggcttcatcaacaatcaagcatccata
aaatattttattgagtggattattgtattgattcttcataaattcccccagtttcttcca
aagttctgggcgtgtttttcttccggtgaagaaaaacttaaaacgagcatttgcacattt
ttatctgttttatcacatttggacaccatcattcaaaatgttccagagaagacgctggtt
ctaaagcaagccctgactgttgccctgcagtggtgtctgagccacaacttcagtgtccga
ctgtatgcactggtggccctcaagaaggtgtggtgtctgtgtaaggccctgcagtttgaa
gagtgtgatgcctggagcacgctgaccgagtgcagcctcagccaggcagaaagcatgcac
ggagcagggaacgccaggaagaactggcagcgcatccaggaccatttcttcttctcaggg
ttccatcccctcaaggactactgtctggagaccatattttacacgctgccacgactctcg
ggcgtcactgaagaggagtggatcgctgtggacaagtttgccagcttcacagacatccct
tccagggcaggggccccacggtattggtccaagactgcgcttagtaagctgagtccaggg
gactggtcccagcaggaccagggttctgctttgggtgaagaagacagccaaccagaatgg
gctgatgtccagaaaaagattatcccatggggacacagtaccctggagtcagacctggag
ctcgtgtctcaggaccgggctgccaagctgggaaagtccatcagtagactgattgttgtg
gcctcgctcatcgacaagccaaccaacttaggagggctgtgcaggacgtgtgaggtgttc
ggggctgcattgcttgtggtcgccaatcttcagtgtgtcagtgacagacagttccagcac
ctcagtgtctctgcggagcagtggctccccctggtggaggtgagaccatcccagctgatg
gcttatctgcagcagaagaaggcggagggctacactgtcattggcgtggagcagacggcg
cagagctgtgacctggcccagtactgcttccctgaaaagtcactgctgctgctgggaaat
gagcgggaagggatcccagccaacctgattcagcagctggacgtgtgtgtggagattcct
cagcagggcatcacccgctccctcaatgtgcacgtgagcggggctctgctgatctgggag
tacaccagacagcggctgcggctgctggggggtgcagagccaccatcctga
DBGET
integrated database retrieval system
