Meriones unguiculatus (Mongolian gerbil): 110555440
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Entry
110555440 CDS
T05884
Symbol
Cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110555440 (Cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mun03041
]
110555440 (Cdc40)
Spliceosome [BR:
mun03041
]
Complex C
Other components
Step II factors
110555440 (Cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
110555440
NCBI-ProteinID:
XP_021504333
LinkDB
All DBs
Position
20:complement(45479891..45529709)
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AA seq
579 aa
AA seq
DB search
MSAAIAALAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKPSLTVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHMWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgattgctgctctagctgcttcgtatggttcgggttcgggatccgaatca
gactcggacagtgagggcagccggtgtccgctgccagccgcggactctctcatgcacttg
accaaatcgccttcagccaagccctctctgaccgtggcggtggactcggctccggaggtg
gcagttaaggaagatctggagactggagttcaccttgaccctgctgtcaaagaagttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttaga
acacagcaaatggctgctcctagaaatatgctttctggatacgctgagccagcacatatc
aatgacttcatgtttgaacagcaaagaagaacatttgccacttacggctatgcgctggac
ccctcattggataaccatcaagtgtctgctaagtatattggctctgtggaagaagctgag
aagaatcaaggtttaactgtatttgaaactggtcagaagaaaacagaaaaaaggaaaaag
ttcaaagaaaatgatgcatctaatattgatggtttcttgggaccgtgggcaaaatatgtg
gatgaaaaagatgtagcgaaaccttcagaagaagaacaaaaggagttggatgaaatcacg
gcgaagaggcagaaaaaaggcaagcaggaagaagagaagcctggggaggagaagacgatc
ctacatgttaaagaaatgtacgactatcaaggcaggtcctaccttcacatacctcaggat
gttggtgttaatctaaggtcatctgtgccacctgaaaaatgttacctaccaaaaaaacaa
attcatatgtggtctggacacacaaagggtgtcagtgcagtcaggctgtttcctctctct
ggacatttgttgctgtcttgttccatggactgtaaaattaagctatgggaagtttatgga
gaccggcgctgtctgagaacatttattggtcacagtaaagctgtgagagacatctgcttc
aacaccgcaggaacgcagttcctcagcgcagcctacgacaggtaccttaagctttgggac
actgagacaggacagtgtatatcaagattcaccaaccgcaaagtgccctactgtgtcaag
ttcaatcccgatgaagataagcagaatctctttgtggctgggatgtctgataagaagatt
gtgcagtgggacattcgcagtggagaggtcgtgcaggaatatgaccggcatttgggagct
gtcaacactattgttttcgttgatgagaatcgaagatttgtgagtacatctgatgataag
agcctacgagtttgggaatgggatatccctgtggattttaagtacatagcggagcccagt
atgcactcaatgcctgcggtgactttgtctcccaacgggaaatggctagcatgccagtca
atggataaccagatcttaatttttggagcacagaacagattcagattaaataagaagaaa
atttttaagggccatatggtagcaggctatgcttgccaggtggacttctcaccagacatg
agctatgtgatttcaggagacggaaatggaaagttaaacatttgggactggaagaccacc
aaactctacagtcgctttaaagcccatgacaaagtgtgcataggcgcagtgtggcatccc
catgagacatccaaggtcatcacgtgtggttgggatggcctcattaaattgtgggattaa
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