Meriones unguiculatus (Mongolian gerbil): 110559378
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Entry
110559378 CDS
T05884
Symbol
Smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03082
ATP-dependent chromatin remodeling
mun04714
Thermogenesis
mun05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110559378 (Smarcc2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110559378 (Smarcc2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110559378 (Smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mun03021
]
110559378 (Smarcc2)
03036 Chromosome and associated proteins [BR:
mun03036
]
110559378 (Smarcc2)
Transcription machinery [BR:
mun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110559378 (Smarcc2)
Chromosome and associated proteins [BR:
mun03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110559378 (Smarcc2)
PBAF complex
110559378 (Smarcc2)
GBAF(ncBAF) complex
110559378 (Smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
110559378
NCBI-ProteinID:
XP_021510444
LinkDB
All DBs
Position
18:5777849..5806236
Genome browser
AA seq
1241 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCYILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPDIEPKLLGKLKDIVKRHQGTISEDKSNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEAAVEDTPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVSDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDESSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKPPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQSSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEEGGTDEARAESQATDEKKEPKEPREGGGSVEEEAKEETSEAPKKDEEKGKEGDSEKE
SEKSDGDLTVDPEKDKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQPPPPALPPGSQPIPPTGAAGPPAAHGLAVPP
AAVASASAGSGAPPGSLGPSEQAGTTAGPQQPQPAGAPQPGAVPPGVPPPGPHGPSPFPN
QQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAAPSIIPFGSLADSISVNLPPP
PNLHGHHHHLPFAPGALPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAI
VAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgagccagttcgacaacgtgaggctctggctcggcaagaactacaagaagtacatccaa
gcggagccaccgaccaacaagtccctgtctagcctggtcgtgcagttgctccagtttcag
gaagaggtttttggcaaacatgtcagcaacgcaccgcttaccaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggatccctgtgctacattcttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggtacagaataattgcctgtctcgacct
aacattttcctgtgcccagatattgagcccaaactgctagggaaattaaaagacattgta
aagcgacaccagggaaccatctctgaggataagagcaatgcctcccatgtcgtgtatcct
gtcccagggaacctagaagaagaggaatgggtccggcccgtcatgaaaagggataaacag
gttctgctgcactggggctactatcctgacagctatgacacatggatcccagctagtgaa
atcgaagcagctgtggaggacactcccactcccgagaagcctaggaaggttcatgccaaa
tggatcttggacacagacactttcaatgagtggatgaatgaggaagactatgaagtcagt
gacgacaaaagccctgtttcccgccgaaagaagatttcagccaaaacattgacagatgag
gtaaacagcccagactcagacagacgggacaagaagggtggaaactataagaagaggaaa
cgctctccctccccttcaccaaccccagaagctaagaagaaaaatgctaagaaaggaccc
tcaacaccttataccaagtcaaagcgaggccacagagaagaggagcaagaagacctgaca
aaggacatggatgagccctctccagtcccaaatgtagaagaggtgacactccccaaaaca
gtcaacactaagaaggactccgagtcagccccagtcaaaggaggcaccatgactgacctg
gatgagcaggaggatgaaagcatggagaccacgggcaaggatgaggatgagagcagcacg
ggcaacaagggggagcagaccaagaacccagacctgcatgaggacaacgtgactgaacag
acccaccacattatcatccccagctatgctgcctggtttgactataacagtgttcatgcc
attgaacggagggctctccccgagttcttcaacggcaagaacaagtccaagactccagag
atctacctggcatatcggaacttcatgattgatacttaccgactgaatccccaggagtat
ctaacatccactgcctgtcggaggaatttggcgggtgatgtctgtgctatcatgagggtc
catgccttcttggaacagtggggtctcattaactaccaggtagatgctgagagtcgacca
accccaatggggcctccaccaacttctcacttccatgtcttggcagacacaccatcaggg
ctggtccctctccagcctaagcccccacagggccgccaggttgatgctgataccaaggct
gggcgaaaggggaaagagctggatgacctggtgccagagacggctaagggcaaaccagag
ctgcagagctctgcctcccaacaaatgctcaactttcctgataaaggcaaagaaaaacca
acagatatgcagaactttgggctgcgcacagacatgtacacaaagaagaatgtcccctct
aagagcaaagctgcagctagcgccactcgggaatggacagagcaggagacactgctgctc
ctggaggctctggaaatgtacaaggacgactggaacaaagtgtctgaacatgtgggaagc
cgcacgcaggatgaatgcatcttgcattttcttcgccttcccattgaagacccatacctg
gaggactcagaggcctctctgggccctctggcctaccaacccatcccctttagtcagtcg
ggcaaccctgttatgagcactgttgccttcctagcctctgtcgtggatcccagagttgcc
tctgctgctgcgaagtcagccctagaagagttctccaaaatgaaggaagaggtgcccaca
gccttggtagaagcccatgtgcggaaagtggaagaggcagccaaagtcacgggcaaggca
gacccagcctttggtctggaaagcagcggcatcgcaggaaccacctctgatgagcctgag
cgcattgaggaaggcgggactgatgaggcgcgggcagagagccaggcaacagatgagaag
aaggagcctaaggaaccacgggaaggagggggtagtgtagaagaagaagcaaaggaggag
acaagtgaggctcccaagaaggatgaagagaaaggaaaagaaggtgacagtgagaaggag
tcagagaagagtgacggggacctgacagttgatcctgagaaagacaaggagccaaaggaa
ggacaggaggaagtgctgaaggaagtggtagagtcagagggggagaggaagacgaaggtg
gagcgagacattggtgaaggcaacctctccacagctgcagctgccgccctagccgctgct
gcagttaaggccaagcacttggctgctgttgaggagaggaagatcaagtctttggtggcc
ctgctagtggagacccaaatgaagaaactagagataaaactccgccattttgaggagctg
gagacgataatggaccgggagcgagaagcactagaatatcagaggcagcagctcctggcc
gaccggcaagccttccacatggagcagctgaagtacgcggagatgagagcccggcagcag
cacttccagcagatgcaccagcagcagccgccgccgcccgccctgcccccaggctcgcag
cccatacctcccaccggggctgctgggccgcctgccgcccacgggctggctgtgcctccg
gccgctgtggcctctgcttctgctggcagtggggcccctcccggaagtttgggcccttct
gaacaggcagggacaactgcagggccacagcagccacaaccagctggagctccccagcct
ggggcagttccaccaggggtacccccccctggaccccatggcccctcaccgttccccaac
caacaaactcctccctcaatgatgccaggggcagtgccaggcagcgggcacccaggcgtg
gcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcctcctcctgctgct
ccatccatcatcccatttggtagtctagctgactccattagtgttaaccttccccctcct
cctaacctgcatgggcatcaccaccatctcccgtttgccccgggcgctctccccccacct
aacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgaccaccaccatg
ccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagccctgccatt
gtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagacccaggcacg
cccctgcctccagaccccacagctccaagcccaggcacagtcacccctgtgccacctcca
cagtga
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