Meriones unguiculatus (Mongolian gerbil): 110560093
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Entry
110560093 CDS
T05884
Symbol
Col2a1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04151
PI3K-Akt signaling pathway
mun04510
Focal adhesion
mun04512
ECM-receptor interaction
mun04974
Protein digestion and absorption
mun05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110560093 (Col2a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110560093 (Col2a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110560093 (Col2a1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110560093 (Col2a1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110560093 (Col2a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mun00536
]
110560093 (Col2a1)
Glycosaminoglycan binding proteins [BR:
mun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110560093 (Col2a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
110560093
NCBI-ProteinID:
XP_021511499
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All DBs
Position
8:5106335..5135104
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AA seq
1486 aa
AA seq
DB search
MIRLGAPQSLVLLTLLVAAVLRCQGQDAQEAGSCLQDGQRYRDKDVWKPSSCRICVCDTG
TVLCDDIICEETDCLHPEIPFGECCPICTADLTTGSGKLGPKGQKGEPGDIKEIVGPKGP
PGPQGPAGEQGPRGDRGEKGEKGPPGPRGRDGEPGTPGNPGPAGPPGPPGPPGFAGNFAA
QMATGFEEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGP
RGPAGPPGKPGDDGEAGKPGKAGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGE
AGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGP
AGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGNPGSPGPAGASGNPGTDGIPGAKGS
AGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGDQGPKGETGPAGPQGA
PGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGP
KGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGV
MGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPTGPAGERGEQGAPGP
SGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARGL
PGTPGTDGPKGAPGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGK
DGGRGLTGPIGPPGPAGANGEKGDMGSPGPSGSTGARGAPGERGETGPPGPAGFAGPPGA
DGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGSRGAQGPPGATGFPGA
AGRVGPPGSNGNPGPPGPPGPAGKEGPKGVRGDNGPPGRAGDPGLQGPAGLPGEKGAPGS
DGPAGSDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGP
VGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGALGAPGAPGPPGAPGPAGP
TGKQGDRGESGAQGPMGPAGPAGARGIPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGL
PGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPAGP
PGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADEAASTLRQHDVEVDATLKS
LNNQIENIRSPDGSRKNPARTCQDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGE
TCVYPNPASVPRKNWWSSKSKERKHIWFGETMNGGFHFSYGDDNLAPNTANVQMTFLRLL
STEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEMRAEGNSRFTYTALKDGCTKH
TGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagtcgctggtgctgctgacgctgctcgtcgccgcggtc
ctccggtgtcagggccaggatgcccaggaggctggcagctgtctgcaggacgggcagagg
tatagagataaggacgtgtggaagccctcgtcctgccgcatctgtgtgtgtgacaccggg
actgtcctctgcgacgacataatatgcgaagaaacagactgcctccacccggagatcccc
ttcggagagtgctgtcctatctgcacagctgacctcaccactggcagtggaaaactaggg
ccaaaggggcagaaaggagaacccggagacatcaaggaaatcgtaggacccaaaggacct
cccggccctcagggacctgccggtgaacaaggacccagaggtgatcgtggtgagaaggga
gaaaagggcccacctggacctcgtggcagagatggagagcctggtacccctggaaatcct
gggcccgctggccctccaggcccccctggtcctcctggctttgctggaaacttcgcggcc
cagatggctacagggtttgaagagaaggctggcggcgcccagatgggagtaatgcagggt
ccgatgggccccatgggacctcgtggacccccaggccctgccggtgcccctggccctcaa
ggatttcaaggcaatcctggtgaacctggcgagcctggtgtctctggtcccatgggtccc
cgtggtcctgctggccctcctggaaaacctggtgatgatggtgaagctgggaaacccgga
aaagctggggaaagaggccttcctggccctcagggtgctcgtggattcccgggaacccca
ggccttcctggagtcaaaggtcacagaggttatccaggcctggatggtgctaagggagaa
gcaggtgctccaggtgtgaagggtgagagtggttcccctggtgaaaacggctccccaggc
cccatgggtccccgtggcctgcctggtgagagaggacggactggccccgctggtgctgct
ggtgcccgaggcaacgatggccagccaggccctgctggacctccgggtcctgtcggtcct
gcaggtggtcctggcttccctggtgctcctggtgccaagggcgaagctggtcccaccggt
gcgcgaggtcctgaaggtgctcagggaccccgtggcgagcctggcaatcctgggtcccct
gggcctgcgggtgcttccggtaacccaggaactgacggcattcccggagccaaaggatct
gccggagctcctggaattgctggtgcccccggcttccctgggccacgtggccctcctggt
cctcaaggtgcaacaggtcctctgggccccaaaggtcagacgggtgagcctggcatcgct
ggcttcaaaggtgatcaaggccctaagggagagaccggtcctgctgggccccagggagcc
cctggccctgctggtgaggaaggcaaacgaggcgctcgaggagagcctggtggcgctgga
cccatcggcccccctggagaaagaggtgctcctggcaaccgtggcttcccaggtcaagac
ggtctggcaggtcccaagggtgcccctggagagcgagggcctagtggcctggctggtccc
aagggagctaatggtgaccctggccgtcctggagaacctggtcttcctggagcccggggt
cttactggtcgccctggtgatgctggtcctcaaggcaaagttggtccttccggagcccct
ggtgaagatggccggcctggacctcctggtcctcagggagctcgtgggcagcctggtgtc
atgggtttccctggccccaaaggtgccaacggcgagcctggcaaagctggtgagaaggga
ttggctggtgctcctggtctgagaggtctgcctggcaaagatggagagacgggagccgca
ggaccacctggccccactggacctgctggtgaacgaggcgagcagggtgctcctggacca
tcagggttccagggacttcctggcccccctggtcctccaggtgaaggtggaaaacaaggt
gaccagggcatccctggtgaagctggagcccctggccttgtgggtcccaggggtgagcga
ggtttccccggtgaacgtggctctcccggtgctcaaggcctccagggtgcccgtggcctc
cctggtactcctggtactgacggtcccaaaggtgcacctggcccagatggtccccctggg
gctcagggccctccaggtctacagggaatgcctggtgagaggggagcagccggtattgct
gggcccaagggagacagaggcgatgttggtgagaaaggcccagagggagctcctggaaag
gatggtggaagaggtctgactggacccatcgggcctccaggcccagcaggggccaatggt
gagaagggagacatgggatcccccggcccttcaggaagtactggtgctcgcggtgctccg
ggtgaacgtggagagactgggcctcctggtcctgctggatttgctgggcctcctggtgcc
gatggccaacctggtgccaagggtgagcaaggagaggccggacagaaaggggacgctggt
gcccctggcccccaaggcccctctggagctcctgggccacagggtcctactggagtgact
ggtccgaagggatcccgaggcgcccaaggccccccgggagccaccggattccctggagct
gctggccgtgttggacccccaggctctaatggcaaccctggaccccctggtccccctggt
cctgctggaaaagaaggtcccaaaggtgttcgaggagacaacggtccccctggcagagct
ggtgaccctggacttcaaggtcctgcaggacttcctggggagaaaggagcgcctggaagt
gatggtcccgctggaagtgatggtcccccaggtccccaggggctggctggtcaaaggggc
attgttggtctgcctggacagcgtggtgagagaggattccctggccttcctggcccatcg
ggtgagcctggcaagcagggtgctcctggtgcatctggggacagaggtcctcccggccct
gtgggacctcctggcctgacaggacctgcgggtgaacctggacgagagggcagccctggt
gctgatggaccccctggcagagatggcgcagctggagtcaagggtgatcgtggtgagacc
ggcgccctgggagctcctggagctcctgggccccctggtgctcctggccctgctggccca
actggcaaacaaggggacagaggagagtctggcgcacaagggcctatgggccccgcagga
cctgctggagcccgtggaatcccaggaccacaaggaccccgaggtgacaaaggagaaact
ggagaggctggagagaggggactgaagggacaccgaggtttcactggacttcagggtctg
cctggccctccgggtccttctggagatcagggtgcttctggccctgctggtccttctggc
cctcgaggtccccctggccccgttggtccctctggcaaagatggctctaatggaatccct
ggccccatcgggcctccaggtcctcgtggacgttcaggcgaaactggccctgctggtcct
cctggaaatcctggtccccctggccctccaggtcctcctggtcctggcatcgacatgtca
gcctttgctggcttaggccagagagagaagggccctgatcccctgcagtacatgcgggcc
gatgaggcggccagcaccctgagacagcatgatgttgaggtggatgccacactcaagtca
ctgaataaccagattgagaacatccgcagccccgatggctcccgcaagaatcctgctcgt
acctgccaagacctgaaactctgccaccccgagtggaagagcggagactactggattgac
cccaaccagggctgcaccttggacgccatgaaagttttctgcaacatggagacaggcgag
acttgtgtctaccccaatccagcaagcgtgcctcggaagaactggtggagcagcaagagc
aaggagaggaagcatatctggttcggagaaaccatgaacggtggcttccatttcagctat
ggtgacgacaacctggcccccaacaccgccaacgtccagatgaccttccttcgcctgctg
tccaccgagggctcccagaacatcacttaccactgtaagaacagcattgcctacctggac
gaagcagccggcaacctcaagaaggccttgctcatccagggctccaacgacgtagagatg
agggctgagggcaacagcaggttcacgtacaccgccctgaaggatggctgcacgaaacac
accggtaagtggggcaagactgtcatcgagtaccgctcgcaaaagacctcgcgccttccc
atcatcgacatcgcacccatggacataggcgggcccgaacaggaattcggtgtggacata
gggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
