Meriones unguiculatus (Mongolian gerbil): 110560516
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Entry
110560516 CDS
T05884
Symbol
Ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mun03041
]
110560516 (Ddx43)
Enzymes [BR:
mun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110560516 (Ddx43)
Spliceosome [BR:
mun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110560516 (Ddx43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
KH-I_KHDC4-BBP
KH_NusA_1st
KH_PNO1_2nd
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
110560516
NCBI-ProteinID:
XP_021512152
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All DBs
Position
6:complement(10580555..10608668)
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AA seq
646 aa
AA seq
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MSRREAAANASSSGVAPRRSSTGSRGAERTATEEPSRRGRVGSRGAGSGWREPAGAAEAP
AAGRREPPLCFGVKNDVVGAVIGRGGSKIREIQNTTNTRIQVIKGNPEAEIKIFGNKAMQ
TKAKTVIDNVVKKQQNYIPGHRVDIIAFQPSVGTETSTGDSVTEDQPLIDWDQIREDALK
WEKKKWADLPPIKKNFYIESATTSSMSQVQIDNWRKENFNITCDDLKDGEKRPIPNPICK
FEDAFQSYPEVMENIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLSYLMPGFI
HLDSQPLAREQRNGPGMLVLTPTRELALQVEAECSKYSYSDLKSVCVYGGGDRDGQIQDV
SKGVDIIIATPGRLNDLQMNNFVNLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRPDRQ
TIMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIITTEEEKRTHIQTFLE
NMSPKDKVIVFVSRKAVADHLSSDLILRHISVESLHGNREQSDREKALENFKTGKVRILI
ATDLASRGLDVHDITHVYNYDFPRNIEEYVHRVGRTGRAGRSGMSITLITRNDWRVATEL
INILERANQSIPEELVLMAERYKANKLKREMEKKMGRPQGKPQKFY
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggcgggaagccgcagccaacgcttcctcctcgggcgttgctccccgacgaagt
tcgacggggtcccggggcgccgagcggaccgcgacggaggagccgagcaggagaggtcgg
gtcggcagcaggggtgcgggcagcggctggagagagcccgcgggtgccgccgaggccccg
gccgccggccgccgcgaaccgccgctctgcttcggggtgaagaacgacgtggtgggcgcg
gtgataggtcgtggtgggtcaaaaattagagaaatccaaaatacaacaaacactagaata
caggtaataaaaggaaatcctgaggcagaaatcaaaatttttggcaataaagccatgcaa
acaaaagcaaaaacagtgatagataatgttgttaaaaaacaacaaaattatatcccagga
cacagagttgatattattgcattccaaccttctgttggaacagaaaccagtacaggtgac
agtgtaacagaagatcaaccattgatagattgggatcaaattcgagaagatgctttgaaa
tgggaaaagaaaaaatgggcagatttacctccaattaagaaaaacttttacatagagtca
gcaacgacaagctcaatgtcacaagtgcaaatagacaactggaggaaagaaaattttaat
ataacatgtgatgacttgaaagatggtgagaaacgtcctatccccaaccctatatgtaaa
tttgaagatgcctttcaaagttatccagaagttatggaaaacattaaaagagcaggcttt
caaaaacctacaccaattcagtcacaggcatggccaatagttctacaaggaatagatctt
attggagtggcacaaactggaacagggaagacgctgtcatatttaatgcctggatttatt
catctagactctcaaccactagccagagaacaaagaaatggaccagggatgttagtcctt
acgcccacccgggaactggcccttcaagtagaagctgaatgttctaaatactcatatagt
gatcttaaaagtgtttgcgtatatggtggtggtgatagagatggacaaatacaagatgtt
tcaaaaggtgtagacatcattattgcaactcctggaagattgaatgacctgcaaatgaat
aattttgtcaacctgaaaagtgtaacctatttggttttagatgaagcagacaagatgctg
gacatgggatttgaaccccagataatgaagattttgttagatgtacgcccagaccggcag
actattatgacaagtgcgacttggccatatgctgtccgccgtcttgcacaatcttatttg
aaagagccaatgattgtctatgttggtactttggatctagttgctgtaagtacagtgaaa
caaaatataatcatcaccacagaagaagagaaacggactcatatccagacctttctagag
aatatgtcacctaaagacaaagtcattgtttttgtcagcagaaaagctgttgccgatcac
ttgtcaagtgacctgattctacggcacatatcagtggagtctctgcatggcaacagagag
cagagtgaccgagagaaagcgctggagaactttaagacaggtaaagtgagaatacttatc
gctactgatttggcatcgcgaggtcttgatgtccatgatatcactcacgtctacaattac
gattttccacggaacattgaagaatatgtacacagagttggacgcactgggagagcaggg
cggtctggcatgtcaattacccttatcacaagaaatgactggagggttgccactgaattg
attaacattctggaaagagcaaatcagagtatcccagaggaacttgtcttaatggctgag
agatacaaagcaaataaactaaaaagagagatggaaaaaaaaatgggaagacctcaagga
aaaccccagaagttttactaa
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