Meriones unguiculatus (Mongolian gerbil): 110560544
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Entry
110560544 CDS
T05884
Symbol
Upf2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X4
KO
K14327
regulator of nonsense transcripts 2
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03013
Nucleocytoplasmic transport
mun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110560544 (Upf2)
03015 mRNA surveillance pathway
110560544 (Upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110560544 (Upf2)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110560544 (Upf2)
mRNA cycle factors
P-body specific factors
110560544 (Upf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
110560544
NCBI-ProteinID:
XP_021512187
LinkDB
All DBs
Position
19:16311553..16428435
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AA seq
1269 aa
AA seq
DB search
MPAERKKSASMEEKESLLNNKEKDCSERRPVSSKEKPKDDLKITAKKEVSKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEDEEKKKQEEEERKKQEEQAKRQQEEAAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKSIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTAAEKFNLNFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSQNKDSNKDDSKETKEPKDNKEASSPDDLELELENLEINDDTLELEGGDEAED
LTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRK
KLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIET
KNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHL
RTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVRKKRPPLQEYVRKLLYKD
LSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVG
IHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVN
PDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVW
TKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSKDS
MTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDEEEEGEEEEEENTDYLTDSN
KENETDEENAEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIP
LHLKSQLRKGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQ
AEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADL
IFKTGGRRR
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagtcagcaagtatggaagagaaagaatctttactaaacaac
aaggagaaagactgcagtgaaaggcggccagtgagcagcaaggagaaaccaaaagacgat
ctcaagatcactgctaagaaggaggtcagtaaggtcccagaagacaaaaagaagaaactg
gaagaagataagagaaaaaaggaagacaaggaacgcaagaaaaaagaggaagaaaaggtg
aaggcagaggaagagttaaagaagaaagaagatgaagaaaagaagaaacaggaagaagaa
gagagaaaaaagcaggaagagcaggccaaacggcagcaagaagaggcagctgctcagctg
aaagagaaagaagaatctcttcagcttcaccaggaagcttgggaacgacatcagttacga
aaggaactccgtagcaagaaccaaaatgctccagacaaccgaccagaggaaaacttcttt
agccgcctagattcaagcttaaagaaaaatactgcttttgttaagaaactaaaaacaatc
acagaacaacagagagactccttgtctcatgattttaatggcctgaatttaagcaaatat
attgcagaagctgtagcttccattgtggaagcaaaattaaaaatctctgatgtgaactgt
gctgtgcacctctgctctctctttcaccagcggtatgctgactttgcaccttcacttctt
caggtgtggaaaaaacattttgaagcaaggaaagaggagaagacgcctaacattaccaag
ctaagaaccgacttgcgtttcattgcggaattgacaatagtgggaattttcactgacaag
gaaggcctttccttaatctatgaacagctgaaaagtattatcaatgctgatcgagaatcc
cacactcatgtttctgtggtaattagtttctgccgccattgtggagatgatattgctgga
cttgtaccgagaaaagtaaagactgctgcagagaagtttaacttgaactttcctcctagt
gagataattagtccagagaagcagcagcctttccagaatcttttaaaagagtactttaca
tctttgaccaaacacctgaaaagggaccacagggagcttcagaatactgagaggcaaaac
aggcgtattctgcattctaaaggagagctaagtgaagataggcataaacagtatgaagaa
tttgcaatgtcctaccagaagctgctggcaaattctcaatccttagcagaccttttggat
gaaaatatgccagatcttcctcaggacaaaccaacaccagaagagcatggacctggaatt
gatatatttacacccggtaaacctggagaatatgacttggaaggtggtatatgggaagat
gaagacgctcgtaatttttatgaaaacctcattgatttgaaagcatttgttccggctatc
ttgtttaaagacaatgaaaaaagtcagaataaagattctaacaaagatgattccaaagag
acaaaagaaccaaaggataataaggaggcatcaagtcccgatgatttggaacttgagttg
gagaatctagaaattaatgatgatacattggagttagaaggtggagatgaagctgaagat
cttacaaagaaactccttgatgaacaagaacaagaagatgaagaagccagcactggatct
catctcaaactcatagtagatgctttcctccagcagttgcccaactgtgtcaaccgagat
ctaattgacaaggcagccatggatttttgcatgaacatgaacacaaaggcaaacaggaag
aaattggtacgggcactcttcatagttcctagacaaaggttggatttgctaccattttat
gcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgttcc
atgctgaggggggatttcagatttcatgtgcgaaaaaaggaccagatcaacattgaaaca
aagaataaaactgtccgttttattggagaactaaccaagtttaaaatgttcaccaaaaat
gatacactgcattgtttaaagatgcttctatcagacttttctcatcatcatattgaaatg
gcatgcactctactggagacgtgtggacgatttcttttcagatctccagaatcacacctg
aggaccagtgtgcttttggagcaaatgatgagaaaaaaacaagcaatgcatcttgatgca
cgatatgttacaatggtagagaatgcatattattactgcaacccacctccagctgagaag
acagtgagaaagaaacgtcctcctcttcaggagtatgtccgcaaacttttgtacaaggat
ctctctaaggtcaccacggagaaggttttgagacagatgcgaaagttgccctggcaggac
caagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaagtacaat
agcattcactgcgtagccaacctcctagcaggactggtgctctaccaggaggatgtcggg
atccacgttgtggatggagtactcgaggatattcgattgggaatggaggttaatcaacct
aaatttaaccagaggcgtatcagtagtgccaagttcttaggagaactttataattacaga
atggtggaatcagctgttattttcaggactctttattcttttacttcatttggtgtcaat
cctgatggttctccaagttcactggacccccctgagcatctgttcagaattagactagtg
tgcactattttggatacctgtggccagtactttgacagaggttccagtaaacgaaaactt
gactgcttccttgtatattttcagcgttatgtttggtggaagaaaagtttggaggtttgg
acaaaagaccatccatttcctattgatatagattacatgatcagtgatacactagaactg
ctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacaagac
ttggaacgagaattcttaataaaactaggcctagtaaatgacaaagactccaaagattct
atgacagaaggagaaaatcttgaagaggatgaagaagaagaagaaggaggagctgaaaca
gaagaacaatctggaaatgaaagtgaagtgaatgagccagaagaagaagagggttctgat
gaggaggaggagggagaagaagaggaagaggagaatacagattacctcacagattccaat
aaggagaatgaaactgatgaagagaatgctgaggtgatgattaaaggaggtggactaaag
catgttccttgtgtagaagatgaggacttcattcaagctctggacaaaatgatgctagaa
aaccttcagcagcgaagtggtgaatctgttaaagtgcaccaacttgatgttgctattcca
ttgcatctcaaaagccagctgaggaaagggccccctcttggtggtggggaaggagaaaca
gagtctgcagacacaatgccatttgtcatgttaacaaggaaaggcaataaacagcagttt
aaaattcttaatgtgcccatgtcatcccaacttgctgcaaatcattggaaccagcaacaa
gcagaacaagaagagaggatgagaatgaaaaagctcacattagatatcaatgaacgacaa
gaacaagaagattatcaagaaatgttgcagtctcttgcacagcgcccagctccagccaac
accaatcgtgagcggcggcctcgataccaacatccaaagggagcacctaatgcagaccta
atctttaagactggtgggaggagacgttga
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